Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.93□□□□□ -1.46
COL9A1P20849 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.93□□□□□ -1.46
COL9A1P20849 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.93□□□□□ -1.46
COL9A1P20849 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
COL9A1P20849 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL9A1P20849 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.93□□□□□ -1.46
COL9A1P20849 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL9A1P20849 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL9A1P20849 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL9A1P20849 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
COL9A1P20849 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.93□□□□□ -1.46
COL9A1P20849 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
COL9A1P20849 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL9A1P20849 AC007114.2-201ENST00000576014 4281 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.92□□□□□ -1.46
COL9A1P20849 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL9A1P20849 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL9A1P20849 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL9A1P20849 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL9A1P20849 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL9A1P20849 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.92□□□□□ -1.46
COL9A1P20849 RNU6-199P-201ENST00000362954 107 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 RNU6-137P-201ENST00000363680 108 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 RNU6-281P-201ENST00000384212 103 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 RNU6-1145P-201ENST00000384246 107 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 RNU6-476P-201ENST00000384726 107 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 MIR134-201ENST00000385258 73 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 RNU6-1248P-201ENST00000391096 64 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.92□□□□□ -1.46
COL9A1P20849 RNU6-712P-201ENST00000410558 100 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 AC119751.6-201ENST00000416712 186 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.92□□□□□ -1.46
COL9A1P20849 RN7SL165P-201ENST00000477476 291 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.92□□□□□ -1.46
COL9A1P20849 DEFB131C-201ENST00000528817 165 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 AC133555.2-201ENST00000550213 292 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 AC090616.3-201ENST00000582184 217 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 AL162431.4-201ENST00000604674 411 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 AL139099.4-201ENST00000614802 114 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL9A1P20849 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL9A1P20849 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.92□□□□□ -1.46
COL9A1P20849 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.92□□□□□ -1.46
COL9A1P20849 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.92□□□□□ -1.46
COL9A1P20849 AC116096.1-201ENST00000566804 2314 ntBASIC5.92□□□□□ -1.46
COL9A1P20849 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.92□□□□□ -1.46
COL9A1P20849 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL9A1P20849 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL9A1P20849 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.91□□□□□ -1.46
COL9A1P20849 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 AC020633.1-201ENST00000468439 2247 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 AC008957.3-201ENST00000624112 2242 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 PHKBP1-201ENST00000450951 1951 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.91□□□□□ -1.46
COL9A1P20849 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.91□□□□□ -1.46
COL9A1P20849 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.91□□□□□ -1.46
COL9A1P20849 SNORA57.1-201ENST00000391227 145 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 U3.36-201ENST00000408418 213 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 RPL23AP40-201ENST00000487630 390 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.91□□□□□ -1.46
COL9A1P20849 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.91□□□□□ -1.46
COL9A1P20849 RAC1P5-201ENST00000512182 576 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 AC004980.4-201ENST00000513375 203 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.91□□□□□ -1.46
COL9A1P20849 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.91□□□□□ -1.46
COL9A1P20849 AC126177.5-201ENST00000549599 178 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.91□□□□□ -1.46
COL9A1P20849 AC007494.1-201ENST00000562293 760 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.91□□□□□ -1.46
COL9A1P20849 AC067852.5-201ENST00000589299 310 ntBASIC5.91□□□□□ -1.46
COL9A1P20849 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.91□□□□□ -1.46
COL9A1P20849 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
COL9A1P20849 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL9A1P20849 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
COL9A1P20849 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL9A1P20849 AL021877.2-201ENST00000624442 10684 ntBASIC5.9□□□□□ -1.46
COL9A1P20849 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL9A1P20849 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.9□□□□□ -1.46
COL9A1P20849 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.9□□□□□ -1.46
COL9A1P20849 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.9□□□□□ -1.46
COL9A1P20849 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL9A1P20849 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
COL9A1P20849 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL9A1P20849 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.9□□□□□ -1.46
COL9A1P20849 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL9A1P20849 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.9□□□□□ -1.46
COL9A1P20849 RN7SKP104-201ENST00000362605 328 ntBASIC5.9□□□□□ -1.46
COL9A1P20849 U3.2-201ENST00000362981 210 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms