Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMNB1P20700 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMNB1P20700 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.27□□□□□ -1.57
LMNB1P20700 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LMNB1P20700 RNU6-263P-201ENST00000363811 107 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 MIR559-201ENST00000385188 96 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 MT-TC-201ENST00000387405 66 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 MIR1271-201ENST00000408537 86 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 EIF4HP2-201ENST00000424380 563 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.27□□□□□ -1.57
LMNB1P20700 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.27□□□□□ -1.57
LMNB1P20700 MRPL48P1-201ENST00000445390 636 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.27□□□□□ -1.57
LMNB1P20700 RPL7P43-201ENST00000478876 753 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 RPL21P93-201ENST00000480465 489 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.27□□□□□ -1.57
LMNB1P20700 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.27□□□□□ -1.57
LMNB1P20700 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.27□□□□□ -1.57
LMNB1P20700 RN7SKP46-201ENST00000515942 234 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 RNU6-1092P-201ENST00000516955 87 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 MTND4P7-201ENST00000523876 130 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMNB1P20700 AL137161.1-201ENST00000532231 390 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.27□□□□□ -1.57
LMNB1P20700 CR383656.7-201ENST00000548164 174 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.27□□□□□ -1.57
LMNB1P20700 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.27□□□□□ -1.57
LMNB1P20700 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
LMNB1P20700 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.27□□□□□ -1.57
LMNB1P20700 AL354984.3-201ENST00000604803 325 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 AP000942.4-201ENST00000604811 241 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 AC096577.2-201ENST00000611455 153 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 AL596275.2-204ENST00000641628 552 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 AL596275.2-206ENST00000641957 626 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 AL592182.3-201ENST00000642132 3304 ntBASIC5.27□□□□□ -1.57
LMNB1P20700 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMNB1P20700 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMNB1P20700 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
LMNB1P20700 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.26□□□□□ -1.57
LMNB1P20700 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMNB1P20700 RNU6-637P-201ENST00000384050 107 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 RNY4P36-201ENST00000391116 96 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 RNU6-754P-201ENST00000391166 107 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AL109755.1-201ENST00000401791 649 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 RPL5P18-201ENST00000406671 891 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 MIR548K-201ENST00000408406 116 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 RNA5SP56-201ENST00000410277 118 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 RPL7P46-201ENST00000425129 740 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AC008065.1-201ENST00000428525 348 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.26□□□□□ -1.57
LMNB1P20700 NOTCH2P1-201ENST00000443481 624 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 snoU109.4-201ENST00000458953 143 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 Y_RNA.654-201ENST00000497848 106 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.26□□□□□ -1.57
LMNB1P20700 HMGB3P15-201ENST00000507326 574 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AC104806.1-201ENST00000508720 308 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AC098591.2-201ENST00000510152 315 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.26□□□□□ -1.57
LMNB1P20700 RNU6-1170P-201ENST00000515974 106 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.26□□□□□ -1.57
LMNB1P20700 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.26□□□□□ -1.57
LMNB1P20700 AP000889.2-201ENST00000532684 490 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.26□□□□□ -1.57
LMNB1P20700 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.26□□□□□ -1.57
LMNB1P20700 AL163153.1-201ENST00000554223 283 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.26□□□□□ -1.57
LMNB1P20700 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.26□□□□□ -1.57
LMNB1P20700 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.26□□□□□ -1.57
LMNB1P20700 AP001330.4-201ENST00000604350 154 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AL592436.1-201ENST00000605135 558 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AC080078.3-201ENST00000605407 463 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 Z82243.1-201ENST00000609432 473 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.26□□□□□ -1.57
LMNB1P20700 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.26□□□□□ -1.57
LMNB1P20700 AC055839.1-201ENST00000634467 498 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.26□□□□□ -1.57
LMNB1P20700 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.26□□□□□ -1.57
LMNB1P20700 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.26□□□□□ -1.57
LMNB1P20700 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMNB1P20700 MTCO1P9-201ENST00000505577 1534 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMNB1P20700 AC074029.4-201ENST00000624796 1859 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 API5P2-201ENST00000397055 1498 ntBASIC5.26□□□□□ -1.57
LMNB1P20700 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.26□□□□□ -1.57
LMNB1P20700 NEAT1-202ENST00000501122 22743 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 AC139769.1-204ENST00000472297 1931 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 AL359922.3-201ENST00000624779 1670 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.25□□□□□ -1.57
LMNB1P20700 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMNB1P20700 AP001350.1-201ENST00000601906 1524 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 LINC01355-201ENST00000566551 5444 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LMNB1P20700 RN7SKP44-201ENST00000363602 316 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 RNU6-960P-201ENST00000364056 120 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 RNA5SP175-201ENST00000364275 119 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LMNB1P20700 AL592114.1-201ENST00000403842 483 ntBASIC5.25□□□□□ -1.57
LMNB1P20700 UBE2FP1-201ENST00000416536 447 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms