Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC137627.1-201ENST00000545761 289 ntBASIC4.43□□□□□ -1.7
ATF4P18848 AC011602.1-201ENST00000546484 331 ntBASIC4.43□□□□□ -1.7
ATF4P18848 HMGB1P14-201ENST00000557424 591 ntBASIC4.43□□□□□ -1.7
ATF4P18848 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.43□□□□□ -1.7
ATF4P18848 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ATF4P18848 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.43□□□□□ -1.7
ATF4P18848 AC011445.2-201ENST00000599274 173 ntBASIC4.43□□□□□ -1.7
ATF4P18848 AC008121.1-201ENST00000603244 268 ntBASIC4.43□□□□□ -1.7
ATF4P18848 IMMP1LP3-201ENST00000604197 224 ntBASIC4.43□□□□□ -1.7
ATF4P18848 AP000654.2-201ENST00000605633 586 ntBASIC4.43□□□□□ -1.7
ATF4P18848 MIR6793-201ENST00000612376 63 ntBASIC4.43□□□□□ -1.7
ATF4P18848 Z69720.2-201ENST00000624755 279 ntBASIC4.43□□□□□ -1.7
ATF4P18848 SNORA17.5-201ENST00000630429 132 ntBASIC4.43□□□□□ -1.7
ATF4P18848 AC010733.2-201ENST00000589496 5702 ntBASIC4.43□□□□□ -1.7
ATF4P18848 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATF4P18848 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.43□□□□□ -1.7
ATF4P18848 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATF4P18848 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.43□□□□□ -1.7
ATF4P18848 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ATF4P18848 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
ATF4P18848 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ATF4P18848 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.43□□□□□ -1.7
ATF4P18848 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ATF4P18848 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ATF4P18848 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
ATF4P18848 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.42□□□□□ -1.7
ATF4P18848 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.42□□□□□ -1.7
ATF4P18848 ZNF807-201ENST00000328088 1707 ntBASIC4.42□□□□□ -1.7
ATF4P18848 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ATF4P18848 Y_RNA.326-201ENST00000365176 113 ntBASIC4.42□□□□□ -1.7
ATF4P18848 Y_RNA.445-201ENST00000384168 102 ntBASIC4.42□□□□□ -1.7
ATF4P18848 RNA5SP284-201ENST00000384547 118 ntBASIC4.42□□□□□ -1.7
ATF4P18848 SNORA1.3-201ENST00000384676 136 ntBASIC4.42□□□□□ -1.7
ATF4P18848 MIR130B-202ENST00000385018 82 ntBASIC4.42□□□□□ -1.7
ATF4P18848 MIR559-201ENST00000385188 96 ntBASIC4.42□□□□□ -1.7
ATF4P18848 MIR143-201ENST00000385300 106 ntBASIC4.42□□□□□ -1.7
ATF4P18848 snosnR66.1-201ENST00000391095 99 ntBASIC4.42□□□□□ -1.7
ATF4P18848 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.42□□□□□ -1.7
ATF4P18848 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.42□□□□□ -1.7
ATF4P18848 HSPE1P12-201ENST00000412576 301 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.42□□□□□ -1.7
ATF4P18848 RPL26P27-201ENST00000414397 437 ntBASIC4.42□□□□□ -1.7
ATF4P18848 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.42□□□□□ -1.7
ATF4P18848 AL035660.1-201ENST00000422041 222 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.42□□□□□ -1.7
ATF4P18848 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 TMEM183AP1-205ENST00000432739 290 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AL391987.1-201ENST00000441025 200 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.42□□□□□ -1.7
ATF4P18848 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.42□□□□□ -1.7
ATF4P18848 AL031274.1-201ENST00000450334 232 ntBASIC4.42□□□□□ -1.7
ATF4P18848 MTATP6P7-201ENST00000453315 681 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.42□□□□□ -1.7
ATF4P18848 AL445433.1-201ENST00000457507 257 ntBASIC4.42□□□□□ -1.7
ATF4P18848 SNORD5.1-201ENST00000458800 75 ntBASIC4.42□□□□□ -1.7
ATF4P18848 RNU7-187P-201ENST00000458985 68 ntBASIC4.42□□□□□ -1.7
ATF4P18848 ACA64.1-201ENST00000459171 127 ntBASIC4.42□□□□□ -1.7
ATF4P18848 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.42□□□□□ -1.7
ATF4P18848 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 AC097473.1-201ENST00000508142 408 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AC026782.1-201ENST00000512952 449 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.42□□□□□ -1.7
ATF4P18848 RNU1-103P-201ENST00000516502 125 ntBASIC4.42□□□□□ -1.7
ATF4P18848 RNU6-307P-201ENST00000516743 106 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AC008627.1-201ENST00000517511 1704 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 PCNAP4-201ENST00000532690 730 ntBASIC4.42□□□□□ -1.7
ATF4P18848 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ATF4P18848 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.42□□□□□ -1.7
ATF4P18848 AC008521.2-201ENST00000591021 259 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AC123912.5-201ENST00000605470 343 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AC009229.3-201ENST00000608056 282 ntBASIC4.42□□□□□ -1.7
ATF4P18848 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.42□□□□□ -1.7
ATF4P18848 AC004825.2-201ENST00000616634 455 ntBASIC4.42□□□□□ -1.7
ATF4P18848 AC244517.12-201ENST00000623581 663 ntBASIC4.42□□□□□ -1.7
ATF4P18848 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.42□□□□□ -1.7
ATF4P18848 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ATF4P18848 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.42□□□□□ -1.7
ATF4P18848 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.42□□□□□ -1.7
ATF4P18848 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATF4P18848 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATF4P18848 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ATF4P18848 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ATF4P18848 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ATF4P18848 SCARNA15-201ENST00000607520 4325 ntBASIC4.41□□□□□ -1.7
ATF4P18848 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATF4P18848 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ATF4P18848 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
ATF4P18848 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ATF4P18848 RNA5SP110-201ENST00000362638 115 ntBASIC4.41□□□□□ -1.7
ATF4P18848 Y_RNA.197-201ENST00000364004 102 ntBASIC4.41□□□□□ -1.7
ATF4P18848 RNU6-1035P-201ENST00000384477 107 ntBASIC4.41□□□□□ -1.7
ATF4P18848 RNU6-790P-201ENST00000384479 105 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms