Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TOP1P11387 AL132857.1-201ENST00000555180 708 ntBASIC2.93□□□□□ -1.94
TOP1P11387 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.93□□□□□ -1.94
TOP1P11387 AGGF1P5-201ENST00000567900 919 ntBASIC2.93□□□□□ -1.94
TOP1P11387 LARP7P2-201ENST00000575306 125 ntBASIC2.93□□□□□ -1.94
TOP1P11387 AC060766.3-201ENST00000591442 263 ntBASIC2.93□□□□□ -1.94
TOP1P11387 AC007621.1-201ENST00000604544 437 ntBASIC2.93□□□□□ -1.94
TOP1P11387 AC106052.1-201ENST00000608029 497 ntBASIC2.93□□□□□ -1.94
TOP1P11387 AC009974.1-201ENST00000608881 455 ntBASIC2.93□□□□□ -1.94
TOP1P11387 AC008993.2-201ENST00000631744 806 ntBASIC2.93□□□□□ -1.94
TOP1P11387 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TOP1P11387 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
TOP1P11387 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TOP1P11387 FRG1BP-201ENST00000278882 761 ntBASIC2.92□□□□□ -1.94
TOP1P11387 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TOP1P11387 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TOP1P11387 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TOP1P11387 SUGT1P1-201ENST00000379514 476 ntBASIC2.92□□□□□ -1.94
TOP1P11387 RNU6-657P-201ENST00000383904 107 ntBASIC2.92□□□□□ -1.94
TOP1P11387 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.92□□□□□ -1.94
TOP1P11387 NANOGP5-201ENST00000424456 877 ntBASIC2.92□□□□□ -1.94
TOP1P11387 AL356867.1-201ENST00000429623 299 ntBASIC2.92□□□□□ -1.94
TOP1P11387 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.92□□□□□ -1.94
TOP1P11387 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.92□□□□□ -1.94
TOP1P11387 AL714022.1-201ENST00000439897 151 ntBASIC2.92□□□□□ -1.94
TOP1P11387 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.92□□□□□ -1.94
TOP1P11387 AC009237.8-201ENST00000445492 379 ntBASIC2.92□□□□□ -1.94
TOP1P11387 VN1R10P-201ENST00000447106 875 ntBASIC2.92□□□□□ -1.94
TOP1P11387 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.92□□□□□ -1.94
TOP1P11387 AC116337.2-201ENST00000477662 156 ntBASIC2.92□□□□□ -1.94
TOP1P11387 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.92□□□□□ -1.94
TOP1P11387 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.92□□□□□ -1.94
TOP1P11387 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.92□□□□□ -1.94
TOP1P11387 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.92□□□□□ -1.94
TOP1P11387 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.92□□□□□ -1.94
TOP1P11387 snoZ278.1-201ENST00000517059 112 ntBASIC2.92□□□□□ -1.94
TOP1P11387 MTCO3P15-201ENST00000526563 574 ntBASIC2.92□□□□□ -1.94
TOP1P11387 AP001646.1-201ENST00000527936 915 ntBASIC2.92□□□□□ -1.94
TOP1P11387 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TOP1P11387 DEFB130C-202ENST00000530001 230 ntBASIC2.92□□□□□ -1.94
TOP1P11387 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.92□□□□□ -1.94
TOP1P11387 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TOP1P11387 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.92□□□□□ -1.94
TOP1P11387 MTCYBP23-201ENST00000558717 1102 ntBASIC2.92□□□□□ -1.94
TOP1P11387 AC103810.1-201ENST00000579873 453 ntBASIC2.92□□□□□ -1.94
TOP1P11387 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TOP1P11387 AP001542.2-201ENST00000593141 364 ntBASIC2.92□□□□□ -1.94
TOP1P11387 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.92□□□□□ -1.94
TOP1P11387 AC009237.15-201ENST00000610252 501 ntBASIC2.92□□□□□ -1.94
TOP1P11387 AL138478.1-201ENST00000612252 832 ntBASIC2.92□□□□□ -1.94
TOP1P11387 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.92□□□□□ -1.94
TOP1P11387 AL121895.2-201ENST00000619558 447 ntBASIC2.92□□□□□ -1.94
TOP1P11387 AC079228.1-201ENST00000624774 1049 ntBASIC2.92□□□□□ -1.94
TOP1P11387 CTSLP2-204ENST00000629029 392 ntBASIC2.92□□□□□ -1.94
TOP1P11387 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
TOP1P11387 Z82195.2-201ENST00000612348 18351 ntBASIC2.92□□□□□ -1.94
TOP1P11387 HMGB1P5-201ENST00000255320 642 ntBASIC2.91□□□□□ -1.94
TOP1P11387 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TOP1P11387 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
TOP1P11387 RNA5SP456-201ENST00000364002 114 ntBASIC2.91□□□□□ -1.94
TOP1P11387 RNU4-51P-201ENST00000364206 140 ntBASIC2.91□□□□□ -1.94
TOP1P11387 Y_RNA.472-201ENST00000384322 102 ntBASIC2.91□□□□□ -1.94
TOP1P11387 AL356131.1-201ENST00000405826 414 ntBASIC2.91□□□□□ -1.94
TOP1P11387 RNU4-22P-201ENST00000411058 166 ntBASIC2.91□□□□□ -1.94
TOP1P11387 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP1P11387 AL096701.2-201ENST00000416920 238 ntBASIC2.91□□□□□ -1.94
TOP1P11387 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.91□□□□□ -1.94
TOP1P11387 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP1P11387 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TOP1P11387 AL590383.1-201ENST00000428602 75 ntBASIC2.91□□□□□ -1.94
TOP1P11387 AC092427.1-202ENST00000430569 476 ntBASIC2.91□□□□□ -1.94
TOP1P11387 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP1P11387 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP1P11387 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.91□□□□□ -1.94
TOP1P11387 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.91□□□□□ -1.94
TOP1P11387 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TOP1P11387 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.91□□□□□ -1.94
TOP1P11387 RNU6-1282P-201ENST00000516735 96 ntBASIC2.91□□□□□ -1.94
TOP1P11387 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.91□□□□□ -1.94
TOP1P11387 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TOP1P11387 MTND1P24-201ENST00000552175 861 ntBASIC2.91□□□□□ -1.94
TOP1P11387 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.91□□□□□ -1.94
TOP1P11387 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.91□□□□□ -1.94
TOP1P11387 AL158163.2-201ENST00000619110 700 ntBASIC2.91□□□□□ -1.94
TOP1P11387 AC079597.1-201ENST00000624306 508 ntBASIC2.91□□□□□ -1.94
TOP1P11387 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.91□□□□□ -1.94
TOP1P11387 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TOP1P11387 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
TOP1P11387 SDAD1P2-201ENST00000441308 2028 ntBASIC2.91□□□□□ -1.94
TOP1P11387 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
TOP1P11387 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TOP1P11387 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.9□□□□□ -1.94
TOP1P11387 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.9□□□□□ -1.95
TOP1P11387 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.9□□□□□ -1.95
TOP1P11387 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
TOP1P11387 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TOP1P11387 RNU6-270P-201ENST00000364131 105 ntBASIC2.9□□□□□ -1.95
TOP1P11387 RNU6-1035P-201ENST00000384477 107 ntBASIC2.9□□□□□ -1.95
TOP1P11387 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.9□□□□□ -1.95
TOP1P11387 NDUFB4P7-201ENST00000423198 363 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms