Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RPS27AP1-201ENST00000475545 471 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 RPL21P103-201ENST00000479921 488 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 RPL22P13-201ENST00000493291 347 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AC073073.1-201ENST00000493920 463 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 FTH1P9-201ENST00000513251 355 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 RNU6-1092P-201ENST00000516955 87 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AC008694.2-201ENST00000517591 306 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AC105031.1-201ENST00000518550 476 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AC100870.1-201ENST00000522035 505 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 OR8R1P-201ENST00000543943 764 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AC023043.2-201ENST00000589678 1026 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AL354984.3-201ENST00000604803 325 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AC011890.2-201ENST00000613393 294 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 AC025034.2-201ENST00000623264 286 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 MIR3653-201ENST00000625572 110 ntBASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CSB-PGBD3P0DP91 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC006971.1-201ENST00000407916 4486 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 DDX10P1-201ENST00000448545 1933 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 GABPAP-201ENST00000419271 1356 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 SMG1P4-204ENST00000523028 4131 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 RNU6-960P-201ENST00000364056 120 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 Y_RNA.212-201ENST00000364177 102 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 RNU6-356P-201ENST00000384140 107 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AL359643.1-201ENST00000404109 423 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 COX5BP7-201ENST00000414780 274 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC114491.1-201ENST00000416095 246 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 RPL23AP43-201ENST00000446445 471 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 SNRPFP3-201ENST00000457792 225 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC079140.5-201ENST00000507882 310 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 RNU6-1095P-201ENST00000516148 108 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 Y_RNA.680-201ENST00000516441 93 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC022882.1-201ENST00000532142 501 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC005868.1-201ENST00000536421 331 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC007375.1-201ENST00000554513 578 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC006349.1-201ENST00000555526 235 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC024619.4-201ENST00000580924 316 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AL591034.3-201ENST00000605511 685 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 DUSP12P1-201ENST00000612874 516 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 TUG1_2.1-201ENST00000614234 87 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC011155.2-201ENST00000623202 216 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 AC055839.1-201ENST00000634467 498 ntBASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CSB-PGBD3P0DP91 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
CSB-PGBD3P0DP91 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CSB-PGBD3P0DP91 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.09□□□□□ -1.44
CSB-PGBD3P0DP91 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 EXOC5P1-201ENST00000510543 1969 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AL158163.1-201ENST00000603915 1649 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 RNA5SP366-201ENST00000365454 123 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 Y_RNA.552-201ENST00000384665 112 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 MIR135A2-201ENST00000384854 100 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 RNA5SP296-201ENST00000410523 111 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AC068533.1-201ENST00000418542 415 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AL031584.1-201ENST00000447169 754 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AL162389.1-201ENST00000449233 177 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AC079804.1-201ENST00000461922 436 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AC008481.1-201ENST00000463278 396 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AC004801.2-202ENST00000463559 283 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AP003730.1-201ENST00000524605 285 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AC018462.2-201ENST00000605375 395 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 AC020634.1-201ENST00000608701 549 ntBASIC6.08□□□□□ -1.44
CSB-PGBD3P0DP91 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms