Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MRPL3P09001 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 AL391994.1-201ENST00000254724 282 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 RNU6-433P-201ENST00000363216 104 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 RNU6-931P-201ENST00000363850 107 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 SNORA4.1-201ENST00000364263 144 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 RNU1-140P-201ENST00000365040 165 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 RNA5SP21-201ENST00000410917 96 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 BX682237.1-201ENST00000415016 335 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.31□□□□□ -2.04
MRPL3P09001 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.31□□□□□ -2.04
MRPL3P09001 AC011233.1-201ENST00000422812 283 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.31□□□□□ -2.04
MRPL3P09001 ZYG11AP1-201ENST00000430329 837 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.31□□□□□ -2.04
MRPL3P09001 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.31□□□□□ -2.04
MRPL3P09001 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 AC011816.1-201ENST00000441346 546 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 RPL23AP20-201ENST00000447965 421 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 RSL24D1P3-201ENST00000449255 495 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 AL353691.1-201ENST00000451332 387 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.31□□□□□ -2.04
MRPL3P09001 snoU109.4-201ENST00000458953 143 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 SETP11-201ENST00000473027 690 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 MTND2P14-201ENST00000482139 351 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 RPS27P27-201ENST00000498779 255 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.31□□□□□ -2.04
MRPL3P09001 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.31□□□□□ -2.04
MRPL3P09001 AC026427.2-201ENST00000506228 536 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
MRPL3P09001 RNU6-150P-201ENST00000516237 95 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.31□□□□□ -2.04
MRPL3P09001 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 VN1R82P-201ENST00000601481 356 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 AC079089.3-201ENST00000603094 673 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 AL031281.1-201ENST00000604049 488 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 AL161629.2-201ENST00000615347 275 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 AL355596.1-201ENST00000565399 3996 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MRPL3P09001 AC005539.1-201ENST00000443768 1479 ntBASIC2.31□□□□□ -2.04
MRPL3P09001 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
MRPL3P09001 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MRPL3P09001 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
MRPL3P09001 AC080100.1-201ENST00000624239 5356 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MRPL3P09001 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.3□□□□□ -2.04
MRPL3P09001 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.3□□□□□ -2.04
MRPL3P09001 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MRPL3P09001 RNU6-1155P-201ENST00000363554 107 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 RNU6-1200P-201ENST00000384162 107 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 RNU6-878P-201ENST00000384578 110 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AL162578.1-201ENST00000406202 378 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 RNU2-47P-201ENST00000410649 186 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.3□□□□□ -2.04
MRPL3P09001 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.3□□□□□ -2.04
MRPL3P09001 MTND5P14-201ENST00000441481 1267 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AL135938.1-201ENST00000443141 297 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.3□□□□□ -2.04
MRPL3P09001 ANKRD26P4-201ENST00000455755 950 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.3□□□□□ -2.04
MRPL3P09001 snoU13.28-201ENST00000459235 104 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AC133134.1-201ENST00000466800 359 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 RPL23AP70-201ENST00000483361 460 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AC023424.2-201ENST00000493479 777 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MRPL3P09001 AC093281.2-201ENST00000510153 597 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 LTV1P1-201ENST00000510683 1237 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AC022861.1-201ENST00000522981 663 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.3□□□□□ -2.04
MRPL3P09001 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.3□□□□□ -2.04
MRPL3P09001 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.3□□□□□ -2.04
MRPL3P09001 AC090888.1-201ENST00000561335 1141 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
MRPL3P09001 MIR4999-201ENST00000585029 91 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AC024560.3-201ENST00000608482 349 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.3□□□□□ -2.04
MRPL3P09001 AL607023.1-201ENST00000620045 248 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AL445264.1-201ENST00000621719 171 ntBASIC2.3□□□□□ -2.04
MRPL3P09001 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.3□□□□□ -2.04
MRPL3P09001 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.3□□□□□ -2.04
MRPL3P09001 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.3□□□□□ -2.04
MRPL3P09001 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MRPL3P09001 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.3□□□□□ -2.04
MRPL3P09001 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.29□□□□□ -2.04
MRPL3P09001 AC026241.1-201ENST00000517873 2142 ntBASIC2.29□□□□□ -2.04
MRPL3P09001 AC138915.1-201ENST00000565427 1685 ntBASIC2.29□□□□□ -2.04
MRPL3P09001 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
MRPL3P09001 RNU1-109P-201ENST00000383960 147 ntBASIC2.29□□□□□ -2.04
MRPL3P09001 RNU6-882P-201ENST00000391025 103 ntBASIC2.29□□□□□ -2.04
MRPL3P09001 AC119751.3-201ENST00000399720 670 ntBASIC2.29□□□□□ -2.04
MRPL3P09001 AL031679.1-201ENST00000400616 525 ntBASIC2.29□□□□□ -2.04
MRPL3P09001 RNA5SP492-201ENST00000411330 114 ntBASIC2.29□□□□□ -2.04
MRPL3P09001 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms