Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 COX6CP5-201ENST00000527162 228 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 FAM92A1P1-201ENST00000528023 890 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC093519.1-201ENST00000566109 298 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 AC110994.2-201ENST00000635481 492 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 DBF4P1-201ENST00000412976 1892 ntBASIC1.98□□□□□ -2.09
HLA-DQB2P05538 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
HLA-DQB2P05538 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 OR5T3-201ENST00000303059 1023 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 GSTA9P-201ENST00000406231 611 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 RNU4-26P-201ENST00000410270 107 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 RNU2-20P-201ENST00000410425 191 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 RNU4-27P-201ENST00000410889 139 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 ARPC3P1-201ENST00000437218 533 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 MTCYBP3-201ENST00000445588 1137 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC011753.1-201ENST00000451001 220 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC087588.1-201ENST00000462203 316 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 RNU6-928P-201ENST00000516876 104 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 GLYCAM1-201ENST00000546596 285 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC135628.1-201ENST00000568867 534 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 MIR4658-201ENST00000584344 65 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC090132.2-201ENST00000615881 347 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 UCA1.1-201ENST00000620952 75 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 AC244517.12-201ENST00000623581 663 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 OR4G11P-202ENST00000642116 1414 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
HLA-DQB2P05538 ZNF849P-201ENST00000594711 1566 ntBASIC1.97□□□□□ -2.09
HLA-DQB2P05538 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RNU6-1072P-201ENST00000384703 107 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RNU6-443P-201ENST00000384780 107 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RNA5SP354-201ENST00000391247 136 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RNU2-47P-201ENST00000410649 186 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 HMGB3P2-201ENST00000411913 584 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC246680.2-201ENST00000422106 389 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RAC1P8-201ENST00000427086 527 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RPL7L1P10-201ENST00000427790 463 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RPL26P6-201ENST00000440913 438 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 MTCO1P48-201ENST00000448024 1096 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RNU6-420P-201ENST00000458780 107 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RNU7-140P-201ENST00000459546 60 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RPL32P14-201ENST00000463196 378 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AL135752.1-201ENST00000479477 471 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC090096.1-201ENST00000489168 390 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC079804.2-201ENST00000490376 200 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC113420.1-201ENST00000507903 571 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 HSPE1P18-201ENST00000517602 280 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 CR383656.7-201ENST00000548164 174 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC008127.2-201ENST00000549925 1075 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC121758.2-201ENST00000553271 193 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AC068135.2-201ENST00000569293 1028 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 LARP7P2-201ENST00000575306 125 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 VN1R78P-201ENST00000597393 564 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DQB2P05538 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 MTND5P29-201ENST00000458676 1807 ntBASIC1.96□□□□□ -2.1
HLA-DQB2P05538 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DQB2P05538 MTND4P1-201ENST00000457501 1466 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 RNU1-105P-201ENST00000363470 161 ntBASIC1.95□□□□□ -2.1
HLA-DQB2P05538 RNU6-792P-201ENST00000363490 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms