Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC239860.2-201ENST00000525886 270 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC007954.1-201ENST00000554198 494 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 GTF3AP2-201ENST00000557014 266 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL049838.1-201ENST00000563647 981 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC138761.3-201ENST00000579993 334 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC091057.2-201ENST00000602594 792 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 RPP40P2-201ENST00000603596 712 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC013553.2-201ENST00000604244 589 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC011451.2-201ENST00000604303 598 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC106791.2-201ENST00000604680 391 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL160281.1-201ENST00000605307 311 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AL603758.1-201ENST00000618654 241 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 MIR6130-201ENST00000619419 109 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 AC091046.2-201ENST00000620775 665 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 OR4G3P-201ENST00000633500 913 ntBASIC2.31□□□□□ -2.04
HLA-DPB1P04440 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HLA-DPB1P04440 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 OR5J1P-201ENST00000313544 939 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 RNU5A-1-201ENST00000362698 116 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 SNORA80A-201ENST00000363922 136 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 SNORA36C-201ENST00000384289 132 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC106883.1-201ENST00000418805 562 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 RPL23AP20-201ENST00000447965 421 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC104472.2-201ENST00000469035 601 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC096576.1-201ENST00000489014 359 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC097462.2-201ENST00000504623 481 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC025881.1-201ENST00000518851 512 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AP000867.2-201ENST00000532468 320 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC009712.1-201ENST00000564938 316 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC005951.2-201ENST00000576282 495 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 MIR3921-201ENST00000577308 85 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC068313.1-201ENST00000604028 1008 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC011458.1-201ENST00000604034 617 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC007619.2-201ENST00000605743 379 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AC024933.1-201ENST00000608472 348 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 MIR7106-201ENST00000612419 65 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 MTCO1P9-201ENST00000505577 1534 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 OR4G2P-202ENST00000641004 1759 ntBASIC2.3□□□□□ -2.04
HLA-DPB1P04440 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HLA-DPB1P04440 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 DDX43P2-201ENST00000604753 1354 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AL161781.1-201ENST00000354277 403 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 RNU6-97P-201ENST00000363387 104 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 MIR325-201ENST00000385260 98 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 RPL21P75-201ENST00000396599 483 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 RPL21P28-201ENST00000401418 483 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AL356057.3-201ENST00000402607 340 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AL592114.1-201ENST00000403842 483 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 RNA5SP21-201ENST00000410917 96 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 RPL19P1-201ENST00000411635 428 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 LSM1P1-201ENST00000438629 273 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 RPL21P39-201ENST00000463605 483 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AL135752.1-201ENST00000479477 471 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 RPL21P93-201ENST00000480465 489 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC233702.1-201ENST00000482905 502 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC021382.1-201ENST00000483523 359 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC093591.1-201ENST00000491435 481 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 RPL21P16-201ENST00000495531 483 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC091951.3-201ENST00000504093 246 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms