Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
LDLRP01130 AL049781.1-201ENST00000623195 3585 ntBASIC3.46□□□□□ -1.86
LDLRP01130 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.46□□□□□ -1.86
LDLRP01130 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.46□□□□□ -1.86
LDLRP01130 AC007256.1-201ENST00000392253 2765 ntBASIC3.46□□□□□ -1.86
LDLRP01130 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.46□□□□□ -1.86
LDLRP01130 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
LDLRP01130 AC092125.1-201ENST00000562568 1995 ntBASIC3.45□□□□□ -1.86
LDLRP01130 CCT4P2-201ENST00000233836 1548 ntBASIC3.45□□□□□ -1.86
LDLRP01130 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDLRP01130 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.45□□□□□ -1.86
LDLRP01130 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LDLRP01130 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDLRP01130 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDLRP01130 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDLRP01130 RNA5SP42-201ENST00000364278 115 ntBASIC3.45□□□□□ -1.86
LDLRP01130 RNU6-259P-201ENST00000383999 107 ntBASIC3.45□□□□□ -1.86
LDLRP01130 MIR591-201ENST00000385290 95 ntBASIC3.45□□□□□ -1.86
LDLRP01130 SNORA48.2-201ENST00000390926 124 ntBASIC3.45□□□□□ -1.86
LDLRP01130 RPL17P12-201ENST00000413391 526 ntBASIC3.45□□□□□ -1.86
LDLRP01130 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.45□□□□□ -1.86
LDLRP01130 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.45□□□□□ -1.86
LDLRP01130 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.45□□□□□ -1.86
LDLRP01130 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.45□□□□□ -1.86
LDLRP01130 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.45□□□□□ -1.86
LDLRP01130 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.45□□□□□ -1.86
LDLRP01130 AC104308.1-201ENST00000454621 333 ntBASIC3.45□□□□□ -1.86
LDLRP01130 HMGN2P16-201ENST00000456802 261 ntBASIC3.45□□□□□ -1.86
LDLRP01130 AC010401.1-201ENST00000463867 348 ntBASIC3.45□□□□□ -1.86
LDLRP01130 RPS4XP22-201ENST00000480755 780 ntBASIC3.45□□□□□ -1.86
LDLRP01130 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.45□□□□□ -1.86
LDLRP01130 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDLRP01130 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.45□□□□□ -1.86
LDLRP01130 RNU6-1095P-201ENST00000516148 108 ntBASIC3.45□□□□□ -1.86
LDLRP01130 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDLRP01130 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDLRP01130 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.45□□□□□ -1.86
LDLRP01130 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.45□□□□□ -1.86
LDLRP01130 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.45□□□□□ -1.86
LDLRP01130 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.45□□□□□ -1.86
LDLRP01130 TPMTP1-201ENST00000592307 737 ntBASIC3.45□□□□□ -1.86
LDLRP01130 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.45□□□□□ -1.86
LDLRP01130 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
LDLRP01130 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDLRP01130 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.45□□□□□ -1.86
LDLRP01130 AC138932.5-201ENST00000617759 563 ntBASIC3.45□□□□□ -1.86
LDLRP01130 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.45□□□□□ -1.86
LDLRP01130 OR5AK4P-201ENST00000635912 903 ntBASIC3.45□□□□□ -1.86
LDLRP01130 TEX21P-201ENST00000447107 1476 ntBASIC3.45□□□□□ -1.86
LDLRP01130 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDLRP01130 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
LDLRP01130 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDLRP01130 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDLRP01130 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDLRP01130 AC058791.1-201ENST00000608412 3198 ntBASIC3.44□□□□□ -1.86
LDLRP01130 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDLRP01130 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDLRP01130 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.44□□□□□ -1.86
LDLRP01130 FRG1BP-201ENST00000278882 761 ntBASIC3.44□□□□□ -1.86
LDLRP01130 RNU5E-5P-201ENST00000365379 116 ntBASIC3.44□□□□□ -1.86
LDLRP01130 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
LDLRP01130 AP002088.1-201ENST00000382740 395 ntBASIC3.44□□□□□ -1.86
LDLRP01130 RNU6-533P-201ENST00000384144 107 ntBASIC3.44□□□□□ -1.86
LDLRP01130 RNU6-114P-201ENST00000384704 105 ntBASIC3.44□□□□□ -1.86
LDLRP01130 BTF3P7-201ENST00000407097 488 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AL359704.1-201ENST00000411586 781 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AC097713.2-201ENST00000430199 356 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AC109583.1-201ENST00000432156 268 ntBASIC3.44□□□□□ -1.86
LDLRP01130 VDAC1P3-201ENST00000434069 851 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AC112653.1-201ENST00000443851 386 ntBASIC3.44□□□□□ -1.86
LDLRP01130 RPL21P23-201ENST00000446654 460 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AC115115.1-201ENST00000449927 248 ntBASIC3.44□□□□□ -1.86
LDLRP01130 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.44□□□□□ -1.86
LDLRP01130 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LDLRP01130 RN7SL330P-201ENST00000469709 307 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AL049873.1-201ENST00000480540 376 ntBASIC3.44□□□□□ -1.86
LDLRP01130 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.44□□□□□ -1.86
LDLRP01130 SNORA31.20-201ENST00000517111 133 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AP003497.1-201ENST00000528472 562 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AP002748.2-201ENST00000528671 348 ntBASIC3.44□□□□□ -1.86
LDLRP01130 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.44□□□□□ -1.86
LDLRP01130 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.44□□□□□ -1.86
LDLRP01130 MIR5697-201ENST00000578045 78 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AC060771.1-201ENST00000582031 164 ntBASIC3.44□□□□□ -1.86
LDLRP01130 MIR3124-201ENST00000582636 67 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.44□□□□□ -1.86
LDLRP01130 AC006566.1-201ENST00000608943 513 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AL356321.1-201ENST00000621360 228 ntBASIC3.44□□□□□ -1.86
LDLRP01130 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
LDLRP01130 AC243312.2-201ENST00000623340 601 ntBASIC3.44□□□□□ -1.86
LDLRP01130 AP003400.5-201ENST00000624827 617 ntBASIC3.44□□□□□ -1.86
LDLRP01130 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.44□□□□□ -1.86
LDLRP01130 AC099654.10-201ENST00000640395 161 ntBASIC3.44□□□□□ -1.86
LDLRP01130 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
LDLRP01130 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDLRP01130 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LDLRP01130 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDLRP01130 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms