Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GGPS1O95749 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GGPS1O95749 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GGPS1O95749 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.41□□□□□ -1.86
GGPS1O95749 AC006378.2-201ENST00000623178 2476 ntBASIC3.41□□□□□ -1.86
GGPS1O95749 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
GGPS1O95749 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
GGPS1O95749 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
GGPS1O95749 MTND4P16-201ENST00000466108 1367 ntBASIC3.4□□□□□ -1.86
GGPS1O95749 AL138713.1-201ENST00000624026 2130 ntBASIC3.4□□□□□ -1.86
GGPS1O95749 MAPK10-322ENST00000641485 4530 ntBASIC3.4□□□□□ -1.86
GGPS1O95749 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
GGPS1O95749 AC073325.2-201ENST00000339545 159 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
GGPS1O95749 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
GGPS1O95749 RNU6-432P-201ENST00000384196 109 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 RPL21P3-201ENST00000395517 478 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.4□□□□□ -1.87
GGPS1O95749 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.4□□□□□ -1.87
GGPS1O95749 RPL7L1P10-201ENST00000427790 463 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 AL590383.1-201ENST00000428602 75 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.4□□□□□ -1.87
GGPS1O95749 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.4□□□□□ -1.87
GGPS1O95749 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.4□□□□□ -1.87
GGPS1O95749 ATG12P2-201ENST00000456830 416 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 AC146507.2-201ENST00000460608 476 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 LINC00888-204ENST00000487386 421 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.4□□□□□ -1.87
GGPS1O95749 RNU6-678P-201ENST00000516832 109 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 RNA5SP380-201ENST00000517190 98 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.4□□□□□ -1.87
GGPS1O95749 MTATP6P15-201ENST00000527233 835 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.4□□□□□ -1.87
GGPS1O95749 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.4□□□□□ -1.87
GGPS1O95749 AC124947.2-202ENST00000552735 133 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.4□□□□□ -1.87
GGPS1O95749 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.4□□□□□ -1.87
GGPS1O95749 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.4□□□□□ -1.87
GGPS1O95749 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.4□□□□□ -1.87
GGPS1O95749 AC106791.2-201ENST00000604680 391 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 HSPE1P7-201ENST00000604681 321 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 AC093838.1-201ENST00000613014 469 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 AC013476.2-201ENST00000614456 459 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 AP002791.1-201ENST00000623291 381 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 AP000676.3-201ENST00000623299 569 ntBASIC3.4□□□□□ -1.87
GGPS1O95749 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.4□□□□□ -1.87
GGPS1O95749 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
GGPS1O95749 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
GGPS1O95749 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
GGPS1O95749 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.39□□□□□ -1.87
GGPS1O95749 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GGPS1O95749 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.39□□□□□ -1.87
GGPS1O95749 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.39□□□□□ -1.87
GGPS1O95749 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.39□□□□□ -1.87
GGPS1O95749 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
GGPS1O95749 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.39□□□□□ -1.87
GGPS1O95749 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
GGPS1O95749 RNU6-223P-201ENST00000362830 107 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GGPS1O95749 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.39□□□□□ -1.87
GGPS1O95749 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
GGPS1O95749 AL139132.1-201ENST00000431587 344 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AC092573.2-201ENST00000434546 243 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.39□□□□□ -1.87
GGPS1O95749 AC009237.8-201ENST00000445492 379 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.39□□□□□ -1.87
GGPS1O95749 AP002884.2-201ENST00000471647 395 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.39□□□□□ -1.87
GGPS1O95749 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.39□□□□□ -1.87
GGPS1O95749 RNU6-1129P-201ENST00000515964 104 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 RNU6-1256P-201ENST00000516539 103 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 RNU6-840P-201ENST00000517275 65 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.39□□□□□ -1.87
GGPS1O95749 OR5G4P-201ENST00000525251 760 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.39□□□□□ -1.87
GGPS1O95749 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.39□□□□□ -1.87
GGPS1O95749 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.39□□□□□ -1.87
GGPS1O95749 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.39□□□□□ -1.87
GGPS1O95749 AP001004.1-201ENST00000582468 324 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AC013553.2-201ENST00000604244 589 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AC112187.2-201ENST00000604345 283 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AC099778.2-201ENST00000610904 211 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AC087683.2-201ENST00000611384 326 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 TUG1_2.1-201ENST00000614234 87 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AC017037.3-201ENST00000625016 472 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
GGPS1O95749 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GGPS1O95749 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
GGPS1O95749 MAPK10-362ENST00000641864 4484 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 AC110774.1-201ENST00000623567 2018 ntBASIC3.39□□□□□ -1.87
GGPS1O95749 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.39□□□□□ -1.87
GGPS1O95749 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.38□□□□□ -1.87
GGPS1O95749 SNORA46-201ENST00000384762 135 ntBASIC3.38□□□□□ -1.87
GGPS1O95749 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
GGPS1O95749 AL354719.1-201ENST00000406535 843 ntBASIC3.38□□□□□ -1.87
GGPS1O95749 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.38□□□□□ -1.87
GGPS1O95749 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.38□□□□□ -1.87
GGPS1O95749 LARP1BP3-201ENST00000437229 869 ntBASIC3.38□□□□□ -1.87
GGPS1O95749 RPS12P18-201ENST00000442381 270 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms