Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
SNRNP200O75643 SNORA16.1-201ENST00000364597 132 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 Z98749.2-208ENST00000381646 500 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 RNA5SP270-201ENST00000411361 118 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 AL590623.1-201ENST00000427864 105 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 MTCO1P57-201ENST00000432182 261 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.51□□□□□ -2.17
SNRNP200O75643 OR10R1P-201ENST00000441524 1141 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.51□□□□□ -2.17
SNRNP200O75643 AP002345.1-201ENST00000456493 928 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 AC090096.1-201ENST00000489168 390 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 AC022447.3-201ENST00000506865 495 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 AC109471.1-201ENST00000511631 612 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.51□□□□□ -2.17
SNRNP200O75643 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.51□□□□□ -2.17
SNRNP200O75643 EIF1AXP2-201ENST00000555940 413 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 AC090616.3-201ENST00000582184 217 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 AC098679.5-201ENST00000624394 571 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.51□□□□□ -2.17
SNRNP200O75643 AC068620.4-201ENST00000636730 1182 ntBASIC1.51□□□□□ -2.17
SNRNP200O75643 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
SNRNP200O75643 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
SNRNP200O75643 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SNRNP200O75643 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SNRNP200O75643 SNORD48-201ENST00000364953 64 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
SNRNP200O75643 RNU6-821P-201ENST00000390995 107 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 RNU2-40P-201ENST00000410833 196 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.5□□□□□ -2.17
SNRNP200O75643 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.5□□□□□ -2.17
SNRNP200O75643 BX322784.1-201ENST00000455793 1077 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 RNA5SP310-201ENST00000459084 116 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.5□□□□□ -2.17
SNRNP200O75643 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.5□□□□□ -2.17
SNRNP200O75643 MTND2P26-201ENST00000528255 1029 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.5□□□□□ -2.17
SNRNP200O75643 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.5□□□□□ -2.17
SNRNP200O75643 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SNRNP200O75643 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.5□□□□□ -2.17
SNRNP200O75643 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SNRNP200O75643 AL355812.1-201ENST00000603215 216 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 BX248123.2-201ENST00000606318 124 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.5□□□□□ -2.17
SNRNP200O75643 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.5□□□□□ -2.17
SNRNP200O75643 OR4G2P-202ENST00000641004 1759 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 AL359851.1-201ENST00000569460 4997 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 SGO1P2-201ENST00000429458 1589 ntBASIC1.5□□□□□ -2.17
SNRNP200O75643 RNA5SP99-201ENST00000364020 114 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.49□□□□□ -2.17
SNRNP200O75643 OR4K11P-201ENST00000431829 904 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 AL603825.1-201ENST00000438481 80 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.49□□□□□ -2.17
SNRNP200O75643 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.49□□□□□ -2.17
SNRNP200O75643 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 RNU6-889P-201ENST00000517189 103 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.49□□□□□ -2.17
SNRNP200O75643 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.49□□□□□ -2.17
SNRNP200O75643 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.49□□□□□ -2.17
SNRNP200O75643 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.49□□□□□ -2.17
SNRNP200O75643 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.49□□□□□ -2.17
SNRNP200O75643 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 AL161629.2-201ENST00000615347 275 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.49□□□□□ -2.17
SNRNP200O75643 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SNRNP200O75643 RNU6-173P-201ENST00000364215 104 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 MIR493-201ENST00000385254 89 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 SFR1P1-201ENST00000403720 688 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 BX510359.4-201ENST00000423750 193 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.49□□□□□ -2.17
SNRNP200O75643 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 FO393419.3-201ENST00000428741 282 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.49□□□□□ -2.17
SNRNP200O75643 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 DPPA3P1-201ENST00000448050 469 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.49□□□□□ -2.17
SNRNP200O75643 snoU13.4-201ENST00000458916 104 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.49□□□□□ -2.17
SNRNP200O75643 AC104689.1-201ENST00000473356 768 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 RNU6-27P-201ENST00000516146 107 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 Y_RNA.675-201ENST00000516389 149 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SNRNP200O75643 AC044913.1-201ENST00000557200 430 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.49□□□□□ -2.17
SNRNP200O75643 AC015720.1-201ENST00000565251 277 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 OR4K8P-201ENST00000578842 1048 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 AL645939.4-201ENST00000604495 135 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 NUTF2P8-201ENST00000604593 363 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 AP001486.3-201ENST00000615334 372 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 OR1S1-201ENST00000624470 978 ntBASIC1.49□□□□□ -2.17
SNRNP200O75643 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
SNRNP200O75643 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.48□□□□□ -2.17
SNRNP200O75643 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.48□□□□□ -2.17
SNRNP200O75643 UBE2V1P9-201ENST00000414760 368 ntBASIC1.48□□□□□ -2.17
SNRNP200O75643 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.48□□□□□ -2.17
SNRNP200O75643 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.48□□□□□ -2.17
SNRNP200O75643 RNU7-95P-201ENST00000459222 64 ntBASIC1.48□□□□□ -2.17
SNRNP200O75643 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.48□□□□□ -2.17
SNRNP200O75643 AC008676.3-201ENST00000521237 435 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms