Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CACNA1FO60840 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CACNA1FO60840 Y_RNA.6-201ENST00000362350 114 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 MIR217-201ENST00000384817 110 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AL590290.1-201ENST00000405336 380 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.31□□□□□ -1.88
CACNA1FO60840 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.31□□□□□ -1.88
CACNA1FO60840 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.31□□□□□ -1.88
CACNA1FO60840 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.31□□□□□ -1.88
CACNA1FO60840 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.31□□□□□ -1.88
CACNA1FO60840 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.31□□□□□ -1.88
CACNA1FO60840 LARP1BP3-201ENST00000437229 869 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.31□□□□□ -1.88
CACNA1FO60840 ZNF114P1-201ENST00000453500 292 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.31□□□□□ -1.88
CACNA1FO60840 AC087385.1-201ENST00000475062 312 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.31□□□□□ -1.88
CACNA1FO60840 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CACNA1FO60840 AC027309.2-201ENST00000520566 192 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CACNA1FO60840 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.31□□□□□ -1.88
CACNA1FO60840 EIF1P4-201ENST00000572664 335 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 NDUFA8P1-201ENST00000605525 367 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AC055764.2-201ENST00000610089 670 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AC023158.2-201ENST00000614876 543 ntBASIC3.31□□□□□ -1.88
CACNA1FO60840 AC107982.1-201ENST00000507171 1300 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CACNA1FO60840 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CACNA1FO60840 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CACNA1FO60840 EXOC5P1-201ENST00000510543 1969 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 MAPK10-362ENST00000641864 4484 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 Y_RNA.25-201ENST00000362528 102 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 RNU6-1042P-201ENST00000384204 107 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 RPL17P12-201ENST00000413391 526 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.3□□□□□ -1.88
CACNA1FO60840 SNRPGP5-201ENST00000456003 220 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 RNU7-170P-201ENST00000459303 61 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 RPL23AP62-201ENST00000463396 453 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 MTCO3P38-201ENST00000468910 766 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 AC128713.1-201ENST00000471495 306 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 AC103975.1-201ENST00000482506 483 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.3□□□□□ -1.88
CACNA1FO60840 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.3□□□□□ -1.88
CACNA1FO60840 RNA5SP135-201ENST00000517019 125 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 ELOCP31-201ENST00000540463 467 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 AC004217.3-201ENST00000551552 878 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.3□□□□□ -1.88
CACNA1FO60840 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.3□□□□□ -1.88
CACNA1FO60840 AP001596.2-201ENST00000608410 312 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 U6.42-201ENST00000618440 107 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 AL603839.4-201ENST00000624658 1005 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.3□□□□□ -1.88
CACNA1FO60840 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CACNA1FO60840 AC004520.1-201ENST00000608362 1413 ntBASIC3.3□□□□□ -1.88
CACNA1FO60840 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CACNA1FO60840 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CACNA1FO60840 RNY3P14-201ENST00000384309 102 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CACNA1FO60840 DBF4P1-201ENST00000412976 1892 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.29□□□□□ -1.88
CACNA1FO60840 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 UBE2V1P8-201ENST00000437166 265 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC011352.3-201ENST00000505162 593 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 MTND2P33-201ENST00000506452 1031 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC090071.1-201ENST00000507713 644 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.29□□□□□ -1.88
CACNA1FO60840 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CACNA1FO60840 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.29□□□□□ -1.88
CACNA1FO60840 RNU4-29P-201ENST00000515943 174 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.29□□□□□ -1.88
CACNA1FO60840 PTP4A1P6-201ENST00000531034 478 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC074029.1-201ENST00000552531 1044 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.29□□□□□ -1.88
CACNA1FO60840 AC012414.6-201ENST00000568241 401 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC090312.2-201ENST00000582687 378 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC138749.5-201ENST00000611461 208 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC107871.2-201ENST00000612894 502 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CACNA1FO60840 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CACNA1FO60840 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CACNA1FO60840 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CACNA1FO60840 AC138915.3-201ENST00000562908 1389 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 RPL21P132-201ENST00000331267 462 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CACNA1FO60840 RNU5D-1-201ENST00000363299 116 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 SNORA25.6-201ENST00000364121 118 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 RNU6-723P-201ENST00000383973 107 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 RNU6-1300P-201ENST00000391046 108 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 RNU6-575P-201ENST00000411326 105 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.29□□□□□ -1.88
CACNA1FO60840 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AL031663.1-201ENST00000437445 219 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC097493.1-201ENST00000463958 372 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC116337.2-201ENST00000477662 156 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC015724.1-201ENST00000478577 156 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 RPL21P103-201ENST00000479921 488 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC005921.1-201ENST00000510589 286 ntBASIC3.29□□□□□ -1.88
CACNA1FO60840 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.29□□□□□ -1.88
CACNA1FO60840 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms