Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RPL7L1P10-201ENST00000427790 463 ntBASIC3.07□□□□□ -1.92
SNX3O60493 OR4C10P-201ENST00000434991 931 ntBASIC3.07□□□□□ -1.92
SNX3O60493 NDUFB4P6-201ENST00000436819 366 ntBASIC3.07□□□□□ -1.92
SNX3O60493 RPL17P49-201ENST00000443728 411 ntBASIC3.07□□□□□ -1.92
SNX3O60493 TAF9P1-201ENST00000445421 515 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.07□□□□□ -1.92
SNX3O60493 AC009961.3-201ENST00000449832 765 ntBASIC3.07□□□□□ -1.92
SNX3O60493 TAF9P2-201ENST00000454958 515 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.07□□□□□ -1.92
SNX3O60493 AC108059.3-201ENST00000456388 214 ntBASIC3.07□□□□□ -1.92
SNX3O60493 RNA5SP310-201ENST00000459084 116 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AC091179.1-201ENST00000461606 579 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AC091965.2-201ENST00000512324 613 ntBASIC3.07□□□□□ -1.92
SNX3O60493 MTCO1P35-201ENST00000515270 228 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AP003181.2-201ENST00000528941 181 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AP003122.4-201ENST00000530980 758 ntBASIC3.07□□□□□ -1.92
SNX3O60493 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.07□□□□□ -1.92
SNX3O60493 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.07□□□□□ -1.92
SNX3O60493 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.07□□□□□ -1.92
SNX3O60493 AP005136.1-201ENST00000579765 429 ntBASIC3.07□□□□□ -1.92
SNX3O60493 MIR4293-201ENST00000584305 78 ntBASIC3.07□□□□□ -1.92
SNX3O60493 KC877982.1-201ENST00000602313 470 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AL606834.2-201ENST00000602954 668 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AL359999.1-201ENST00000604513 294 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AC121334.2-201ENST00000605387 271 ntBASIC3.07□□□□□ -1.92
SNX3O60493 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.07□□□□□ -1.92
SNX3O60493 AC009570.1-201ENST00000609599 745 ntBASIC3.07□□□□□ -1.92
SNX3O60493 MIR6748-201ENST00000610433 71 ntBASIC3.07□□□□□ -1.92
SNX3O60493 BX664608.1-201ENST00000610519 487 ntBASIC3.07□□□□□ -1.92
SNX3O60493 MIR378J-201ENST00000611988 109 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AL158063.1-201ENST00000615349 536 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AC010133.1-201ENST00000615809 842 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AC099654.13-201ENST00000639774 207 ntBASIC3.07□□□□□ -1.92
SNX3O60493 ASNSP3-201ENST00000451989 1306 ntBASIC3.07□□□□□ -1.92
SNX3O60493 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNX3O60493 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SNX3O60493 AC021755.1-201ENST00000559747 1447 ntBASIC3.07□□□□□ -1.92
SNX3O60493 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNX3O60493 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SNX3O60493 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SNX3O60493 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SNX3O60493 AC007256.1-201ENST00000392253 2765 ntBASIC3.06□□□□□ -1.92
SNX3O60493 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNX3O60493 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.06□□□□□ -1.92
SNX3O60493 RNA5SP295-201ENST00000362655 121 ntBASIC3.06□□□□□ -1.92
SNX3O60493 SNORA70.2-201ENST00000364506 135 ntBASIC3.06□□□□□ -1.92
SNX3O60493 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SNX3O60493 RNU6-278P-201ENST00000390945 109 ntBASIC3.06□□□□□ -1.92
SNX3O60493 MIR887-201ENST00000401258 79 ntBASIC3.06□□□□□ -1.92
SNX3O60493 PPIAP31-201ENST00000405422 495 ntBASIC3.06□□□□□ -1.92
SNX3O60493 MIR1290-201ENST00000408735 78 ntBASIC3.06□□□□□ -1.92
SNX3O60493 AL035423.1-201ENST00000420331 213 ntBASIC3.06□□□□□ -1.92
SNX3O60493 AL139281.1-201ENST00000422120 335 ntBASIC3.06□□□□□ -1.92
SNX3O60493 NDUFB4P7-201ENST00000423198 363 ntBASIC3.06□□□□□ -1.92
SNX3O60493 RSL24D1P6-201ENST00000426934 401 ntBASIC3.06□□□□□ -1.92
SNX3O60493 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX3O60493 AL353705.1-201ENST00000433468 480 ntBASIC3.06□□□□□ -1.92
SNX3O60493 SDAD1P2-201ENST00000441308 2028 ntBASIC3.06□□□□□ -1.92
SNX3O60493 NOTCH2P1-201ENST00000443481 624 ntBASIC3.06□□□□□ -1.92
SNX3O60493 AP000936.2-201ENST00000447151 681 ntBASIC3.06□□□□□ -1.92
SNX3O60493 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX3O60493 TPT1P12-201ENST00000448968 492 ntBASIC3.06□□□□□ -1.92
SNX3O60493 ELOCP23-201ENST00000452014 332 ntBASIC3.06□□□□□ -1.92
SNX3O60493 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX3O60493 MTND2P24-201ENST00000453434 806 ntBASIC3.06□□□□□ -1.92
SNX3O60493 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX3O60493 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX3O60493 AC010631.1-201ENST00000474150 156 ntBASIC3.06□□□□□ -1.92
SNX3O60493 RPS27AP1-201ENST00000475545 471 ntBASIC3.06□□□□□ -1.92
SNX3O60493 RPL21P13-201ENST00000488305 481 ntBASIC3.06□□□□□ -1.92
SNX3O60493 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX3O60493 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX3O60493 AC114797.1-201ENST00000514003 728 ntBASIC3.06□□□□□ -1.92
SNX3O60493 SCARNA15.2-201ENST00000516409 127 ntBASIC3.06□□□□□ -1.92
SNX3O60493 RNU6-1256P-201ENST00000516539 103 ntBASIC3.06□□□□□ -1.92
SNX3O60493 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX3O60493 AL355836.1-201ENST00000555951 870 ntBASIC3.06□□□□□ -1.92
SNX3O60493 AC136624.4-201ENST00000573044 370 ntBASIC3.06□□□□□ -1.92
SNX3O60493 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX3O60493 AC009977.1-201ENST00000586015 570 ntBASIC3.06□□□□□ -1.92
SNX3O60493 HMGN1P30-201ENST00000589286 268 ntBASIC3.06□□□□□ -1.92
SNX3O60493 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX3O60493 AL627309.6-201ENST00000606857 840 ntBASIC3.06□□□□□ -1.92
SNX3O60493 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX3O60493 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX3O60493 AC025594.3-201ENST00000613068 790 ntBASIC3.06□□□□□ -1.92
SNX3O60493 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.06□□□□□ -1.92
SNX3O60493 AL603839.4-201ENST00000624658 1005 ntBASIC3.06□□□□□ -1.92
SNX3O60493 RNA5SP196-201ENST00000625967 102 ntBASIC3.06□□□□□ -1.92
SNX3O60493 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
SNX3O60493 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNX3O60493 AC090740.1-201ENST00000623193 2262 ntBASIC3.05□□□□□ -1.92
SNX3O60493 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SNX3O60493 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX3O60493 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNX3O60493 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
SNX3O60493 AC092104.1-201ENST00000497346 1441 ntBASIC3.05□□□□□ -1.92
SNX3O60493 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNX3O60493 FGF7P2-201ENST00000332473 296 ntBASIC3.05□□□□□ -1.92
SNX3O60493 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms