Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 GLYCAM1-201ENST00000546596 285 ntBASIC1.31□□□□□ -2.2
URB1O60287 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
URB1O60287 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
URB1O60287 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
URB1O60287 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
URB1O60287 ZNF519P1-201ENST00000449011 1626 ntBASIC1.31□□□□□ -2.2
URB1O60287 RNU2-40P-201ENST00000410833 196 ntBASIC1.31□□□□□ -2.2
URB1O60287 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.31□□□□□ -2.2
URB1O60287 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.31□□□□□ -2.2
URB1O60287 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.31□□□□□ -2.2
URB1O60287 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.31□□□□□ -2.2
URB1O60287 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.31□□□□□ -2.2
URB1O60287 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.31□□□□□ -2.2
URB1O60287 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC1.31□□□□□ -2.2
URB1O60287 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.31□□□□□ -2.2
URB1O60287 AL360085.1-201ENST00000604713 532 ntBASIC1.31□□□□□ -2.2
URB1O60287 BNIP3P4-201ENST00000604946 565 ntBASIC1.31□□□□□ -2.2
URB1O60287 AC099654.7-201ENST00000635788 2127 ntBASIC1.3□□□□□ -2.2
URB1O60287 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
URB1O60287 RNA5SP139-201ENST00000364340 117 ntBASIC1.3□□□□□ -2.2
URB1O60287 SRIP3-201ENST00000413200 219 ntBASIC1.3□□□□□ -2.2
URB1O60287 HMGN1P8-201ENST00000463578 288 ntBASIC1.3□□□□□ -2.2
URB1O60287 RPS23P3-201ENST00000470993 430 ntBASIC1.3□□□□□ -2.2
URB1O60287 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.3□□□□□ -2.2
URB1O60287 AP003033.1-201ENST00000527244 415 ntBASIC1.3□□□□□ -2.2
URB1O60287 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.3□□□□□ -2.2
URB1O60287 MIR6840-201ENST00000611937 71 ntBASIC1.3□□□□□ -2.2
URB1O60287 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
URB1O60287 CENPCP1-201ENST00000533085 2578 ntBASIC1.3□□□□□ -2.2
URB1O60287 FO393413.1-201ENST00000402892 195 ntBASIC1.29□□□□□ -2.2
URB1O60287 MTND4LP21-201ENST00000415303 295 ntBASIC1.29□□□□□ -2.2
URB1O60287 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.29□□□□□ -2.2
URB1O60287 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.29□□□□□ -2.2
URB1O60287 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.29□□□□□ -2.2
URB1O60287 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.29□□□□□ -2.2
URB1O60287 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.29□□□□□ -2.2
URB1O60287 ARL5AP3-201ENST00000439327 386 ntBASIC1.29□□□□□ -2.2
URB1O60287 ARL5AP2-201ENST00000444698 533 ntBASIC1.29□□□□□ -2.2
URB1O60287 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.29□□□□□ -2.2
URB1O60287 MRPL42P6-201ENST00000486397 371 ntBASIC1.29□□□□□ -2.2
URB1O60287 MTCO2P9-201ENST00000503214 694 ntBASIC1.29□□□□□ -2.2
URB1O60287 CDC42P4-201ENST00000510507 563 ntBASIC1.29□□□□□ -2.2
URB1O60287 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.29□□□□□ -2.2
URB1O60287 OR4V1P-201ENST00000525394 1140 ntBASIC1.29□□□□□ -2.2
URB1O60287 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.29□□□□□ -2.2
URB1O60287 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.29□□□□□ -2.2
URB1O60287 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.29□□□□□ -2.2
URB1O60287 RNU6-600P-201ENST00000362524 99 ntBASIC1.29□□□□□ -2.2
URB1O60287 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.29□□□□□ -2.2
URB1O60287 RNU6-1105P-201ENST00000384774 107 ntBASIC1.29□□□□□ -2.2
URB1O60287 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.29□□□□□ -2.2
URB1O60287 SUMO1P4-201ENST00000429430 302 ntBASIC1.29□□□□□ -2.2
URB1O60287 AL365400.1-201ENST00000431854 640 ntBASIC1.29□□□□□ -2.2
URB1O60287 MTND2P29-201ENST00000438595 412 ntBASIC1.29□□□□□ -2.2
URB1O60287 AL031659.1-201ENST00000447075 539 ntBASIC1.29□□□□□ -2.2
URB1O60287 RNA5SP61-201ENST00000516453 100 ntBASIC1.29□□□□□ -2.2
URB1O60287 OSBPL9P3-201ENST00000534523 595 ntBASIC1.29□□□□□ -2.2
URB1O60287 AC007229.1-201ENST00000590455 412 ntBASIC1.29□□□□□ -2.2
URB1O60287 AP003117.1-201ENST00000602771 554 ntBASIC1.29□□□□□ -2.2
URB1O60287 AC112503.2-201ENST00000609005 552 ntBASIC1.29□□□□□ -2.2
URB1O60287 MIR6076-201ENST00000617521 113 ntBASIC1.29□□□□□ -2.2
URB1O60287 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.29□□□□□ -2.2
URB1O60287 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.29□□□□□ -2.2
URB1O60287 DDX10P1-201ENST00000448545 1933 ntBASIC1.28□□□□□ -2.2
URB1O60287 RNU4-41P-201ENST00000364426 143 ntBASIC1.28□□□□□ -2.2
URB1O60287 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
URB1O60287 AC005297.2-201ENST00000450430 606 ntBASIC1.28□□□□□ -2.2
URB1O60287 AL513343.1-201ENST00000451818 792 ntBASIC1.28□□□□□ -2.2
URB1O60287 SUMO2P6-201ENST00000505273 288 ntBASIC1.28□□□□□ -2.2
URB1O60287 AC093281.2-201ENST00000510153 597 ntBASIC1.28□□□□□ -2.2
URB1O60287 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.28□□□□□ -2.2
URB1O60287 CENPUP2-201ENST00000555897 1186 ntBASIC1.28□□□□□ -2.2
URB1O60287 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.28□□□□□ -2.2
URB1O60287 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.28□□□□□ -2.2
URB1O60287 AP003122.6-201ENST00000623831 495 ntBASIC1.28□□□□□ -2.2
URB1O60287 RNU4-72P-201ENST00000410754 173 ntBASIC1.28□□□□□ -2.2
URB1O60287 IFNA20P-201ENST00000436840 528 ntBASIC1.28□□□□□ -2.2
URB1O60287 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.28□□□□□ -2.2
URB1O60287 AL445687.1-201ENST00000439946 251 ntBASIC1.28□□□□□ -2.2
URB1O60287 AC234775.1-201ENST00000454247 670 ntBASIC1.28□□□□□ -2.2
URB1O60287 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.28□□□□□ -2.2
URB1O60287 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.28□□□□□ -2.2
URB1O60287 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.28□□□□□ -2.2
URB1O60287 AC006499.2-201ENST00000513470 337 ntBASIC1.28□□□□□ -2.2
URB1O60287 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.28□□□□□ -2.2
URB1O60287 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.28□□□□□ -2.2
URB1O60287 CYP3A137P-201ENST00000562436 69 ntBASIC1.28□□□□□ -2.2
URB1O60287 AL161734.1-201ENST00000609720 557 ntBASIC1.28□□□□□ -2.2
URB1O60287 MIR6788-201ENST00000618842 66 ntBASIC1.28□□□□□ -2.2
URB1O60287 AC006249.1-201ENST00000621223 471 ntBASIC1.28□□□□□ -2.2
URB1O60287 AC025048.6-202ENST00000627667 438 ntBASIC1.28□□□□□ -2.2
URB1O60287 AC110079.1-202ENST00000635213 138 ntBASIC1.28□□□□□ -2.2
URB1O60287 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.21
URB1O60287 MTCO1P4-201ENST00000520516 1409 ntBASIC1.27□□□□□ -2.21
URB1O60287 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
URB1O60287 RNU6-461P-201ENST00000364195 107 ntBASIC1.27□□□□□ -2.21
URB1O60287 MIR520E-201ENST00000384867 87 ntBASIC1.27□□□□□ -2.21
URB1O60287 RPL26P37-201ENST00000411983 438 ntBASIC1.27□□□□□ -2.21
URB1O60287 AC233728.2-201ENST00000425348 757 ntBASIC1.27□□□□□ -2.21
URB1O60287 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms