Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC087821.2-201ENST00000637086 450 ntBASIC2.15□□□□□ -2.07
SGCEO43556 MTCO1P9-201ENST00000505577 1534 ntBASIC2.15□□□□□ -2.07
SGCEO43556 MTCO1P4-201ENST00000520516 1409 ntBASIC2.15□□□□□ -2.07
SGCEO43556 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.15□□□□□ -2.07
SGCEO43556 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.15□□□□□ -2.07
SGCEO43556 AC009902.3-201ENST00000606235 2172 ntBASIC2.15□□□□□ -2.07
SGCEO43556 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SGCEO43556 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SGCEO43556 RNA5SP68-201ENST00000363885 119 ntBASIC2.14□□□□□ -2.07
SGCEO43556 SNORA36C-201ENST00000384289 132 ntBASIC2.14□□□□□ -2.07
SGCEO43556 SNORA51.11-201ENST00000384442 131 ntBASIC2.14□□□□□ -2.07
SGCEO43556 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SGCEO43556 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SGCEO43556 HMGB1P17-201ENST00000403495 628 ntBASIC2.14□□□□□ -2.07
SGCEO43556 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.14□□□□□ -2.07
SGCEO43556 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.14□□□□□ -2.07
SGCEO43556 HMGB1P49-201ENST00000418882 569 ntBASIC2.14□□□□□ -2.07
SGCEO43556 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.14□□□□□ -2.07
SGCEO43556 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.14□□□□□ -2.07
SGCEO43556 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SGCEO43556 AC005297.2-201ENST00000450430 606 ntBASIC2.14□□□□□ -2.07
SGCEO43556 AC108938.1-201ENST00000451204 136 ntBASIC2.14□□□□□ -2.07
SGCEO43556 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.14□□□□□ -2.07
SGCEO43556 AL139109.1-201ENST00000455491 297 ntBASIC2.14□□□□□ -2.07
SGCEO43556 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.14□□□□□ -2.07
SGCEO43556 AC090453.1-201ENST00000495560 436 ntBASIC2.14□□□□□ -2.07
SGCEO43556 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.14□□□□□ -2.07
SGCEO43556 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SGCEO43556 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.14□□□□□ -2.07
SGCEO43556 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.14□□□□□ -2.07
SGCEO43556 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.14□□□□□ -2.07
SGCEO43556 AL391261.3-201ENST00000557194 520 ntBASIC2.14□□□□□ -2.07
SGCEO43556 AC044913.1-201ENST00000557200 430 ntBASIC2.14□□□□□ -2.07
SGCEO43556 HSPE1P3-201ENST00000559254 309 ntBASIC2.14□□□□□ -2.07
SGCEO43556 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.14□□□□□ -2.07
SGCEO43556 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.14□□□□□ -2.07
SGCEO43556 AC007621.1-201ENST00000604544 437 ntBASIC2.14□□□□□ -2.07
SGCEO43556 OR10AB1P-201ENST00000609613 938 ntBASIC2.14□□□□□ -2.07
SGCEO43556 MIR6817-201ENST00000615588 66 ntBASIC2.14□□□□□ -2.07
SGCEO43556 AL596245.1-201ENST00000618994 362 ntBASIC2.14□□□□□ -2.07
SGCEO43556 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.14□□□□□ -2.07
SGCEO43556 CU459211.1-201ENST00000635667 749 ntBASIC2.14□□□□□ -2.07
SGCEO43556 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.14□□□□□ -2.07
SGCEO43556 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SGCEO43556 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SGCEO43556 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SGCEO43556 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SGCEO43556 AL596028.1-201ENST00000326971 197 ntBASIC2.13□□□□□ -2.07
SGCEO43556 Y_RNA.25-201ENST00000362528 102 ntBASIC2.13□□□□□ -2.07
SGCEO43556 RNU6-741P-201ENST00000383889 107 ntBASIC2.13□□□□□ -2.07
SGCEO43556 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
SGCEO43556 RNU6-217P-201ENST00000384164 104 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AL359511.1-201ENST00000402970 211 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AL513331.1-201ENST00000411908 397 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.13□□□□□ -2.07
SGCEO43556 PPP1R11P2-201ENST00000423543 382 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.13□□□□□ -2.07
SGCEO43556 RPL39P6-201ENST00000448289 150 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SGCEO43556 MRPL42P4-201ENST00000453267 443 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.13□□□□□ -2.07
SGCEO43556 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.13□□□□□ -2.07
SGCEO43556 LARP1BP2-201ENST00000486594 519 ntBASIC2.13□□□□□ -2.07
SGCEO43556 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.13□□□□□ -2.07
SGCEO43556 RNA5SP148-201ENST00000516527 94 ntBASIC2.13□□□□□ -2.07
SGCEO43556 RNU6-1261P-201ENST00000517194 104 ntBASIC2.13□□□□□ -2.07
SGCEO43556 RNA5SP291-201ENST00000517222 105 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.13□□□□□ -2.07
SGCEO43556 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.13□□□□□ -2.07
SGCEO43556 UBTFL10-201ENST00000528532 562 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AC087241.2-201ENST00000535801 324 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.13□□□□□ -2.07
SGCEO43556 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.13□□□□□ -2.07
SGCEO43556 AC106782.4-201ENST00000568264 210 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.13□□□□□ -2.07
SGCEO43556 SNORD53-201ENST00000579969 78 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AC090330.1-201ENST00000588646 764 ntBASIC2.13□□□□□ -2.07
SGCEO43556 RPS15AP11-201ENST00000594193 385 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.13□□□□□ -2.07
SGCEO43556 AC026741.1-201ENST00000605892 482 ntBASIC2.13□□□□□ -2.07
SGCEO43556 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AC008498.1-201ENST00000613012 531 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AC025594.3-201ENST00000613068 790 ntBASIC2.13□□□□□ -2.07
SGCEO43556 AL159972.1-201ENST00000625150 448 ntBASIC2.13□□□□□ -2.07
SGCEO43556 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.13□□□□□ -2.07
SGCEO43556 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SGCEO43556 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
SGCEO43556 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SGCEO43556 AC010329.5-201ENST00000623497 2174 ntBASIC2.12□□□□□ -2.07
SGCEO43556 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.12□□□□□ -2.07
SGCEO43556 RNU6-525P-201ENST00000363685 104 ntBASIC2.12□□□□□ -2.07
SGCEO43556 SNORD114-30-201ENST00000364448 72 ntBASIC2.12□□□□□ -2.07
SGCEO43556 U8.8-201ENST00000365399 135 ntBASIC2.12□□□□□ -2.07
SGCEO43556 RNU6-609P-201ENST00000365459 107 ntBASIC2.12□□□□□ -2.07
SGCEO43556 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
SGCEO43556 RNU6-301P-201ENST00000384277 107 ntBASIC2.12□□□□□ -2.07
SGCEO43556 MIR518C-201ENST00000384822 101 ntBASIC2.12□□□□□ -2.07
SGCEO43556 SNRPEP2-201ENST00000397592 279 ntBASIC2.12□□□□□ -2.07
SGCEO43556 RPS4XP8-201ENST00000402039 771 ntBASIC2.12□□□□□ -2.07
SGCEO43556 AC008850.1-201ENST00000427546 362 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms