Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
RTCAO00442 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
RTCAO00442 RNA5SP119-201ENST00000362715 117 ntBASIC3.15□□□□□ -1.91
RTCAO00442 RNU5E-8P-201ENST00000363502 116 ntBASIC3.15□□□□□ -1.91
RTCAO00442 SNORD56.5-201ENST00000364281 72 ntBASIC3.15□□□□□ -1.91
RTCAO00442 SNORA48.7-201ENST00000391302 135 ntBASIC3.15□□□□□ -1.91
RTCAO00442 RN7SKP285-201ENST00000410137 318 ntBASIC3.15□□□□□ -1.91
RTCAO00442 RN7SKP27-201ENST00000410684 333 ntBASIC3.15□□□□□ -1.91
RTCAO00442 RNU2-25P-201ENST00000411041 191 ntBASIC3.15□□□□□ -1.91
RTCAO00442 HMGB1P11-201ENST00000413899 637 ntBASIC3.15□□□□□ -1.91
RTCAO00442 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.15□□□□□ -1.91
RTCAO00442 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.15□□□□□ -1.91
RTCAO00442 AL445669.1-201ENST00000426743 755 ntBASIC3.15□□□□□ -1.91
RTCAO00442 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.15□□□□□ -1.91
RTCAO00442 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.15□□□□□ -1.91
RTCAO00442 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.15□□□□□ -1.91
RTCAO00442 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.15□□□□□ -1.91
RTCAO00442 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.15□□□□□ -1.91
RTCAO00442 CBWD4P-201ENST00000445695 655 ntBASIC3.15□□□□□ -1.91
RTCAO00442 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.15□□□□□ -1.91
RTCAO00442 RPL30P9-201ENST00000465586 330 ntBASIC3.15□□□□□ -1.91
RTCAO00442 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.15□□□□□ -1.91
RTCAO00442 AP001025.2-201ENST00000490908 477 ntBASIC3.15□□□□□ -1.91
RTCAO00442 OR5BM1P-201ENST00000512021 366 ntBASIC3.15□□□□□ -1.91
RTCAO00442 AC118465.1-201ENST00000513820 1271 ntBASIC3.15□□□□□ -1.91
RTCAO00442 RNU6-759P-201ENST00000516740 103 ntBASIC3.15□□□□□ -1.91
RTCAO00442 AC106038.2-201ENST00000520706 568 ntBASIC3.15□□□□□ -1.91
RTCAO00442 SUB1P1-201ENST00000524415 382 ntBASIC3.15□□□□□ -1.91
RTCAO00442 HSPE1P20-201ENST00000538133 289 ntBASIC3.15□□□□□ -1.91
RTCAO00442 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.15□□□□□ -1.91
RTCAO00442 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.15□□□□□ -1.91
RTCAO00442 SETP2-201ENST00000553886 926 ntBASIC3.15□□□□□ -1.91
RTCAO00442 TRAV28-201ENST00000557548 323 ntBASIC3.15□□□□□ -1.91
RTCAO00442 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.15□□□□□ -1.91
RTCAO00442 PCMTD1P2-201ENST00000565017 355 ntBASIC3.15□□□□□ -1.91
RTCAO00442 MIR544B-201ENST00000582372 78 ntBASIC3.15□□□□□ -1.91
RTCAO00442 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.15□□□□□ -1.91
RTCAO00442 AC005498.1-201ENST00000592125 465 ntBASIC3.15□□□□□ -1.91
RTCAO00442 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.15□□□□□ -1.91
RTCAO00442 MTCYBP22-201ENST00000603788 447 ntBASIC3.15□□□□□ -1.91
RTCAO00442 AL137843.1-201ENST00000605078 385 ntBASIC3.15□□□□□ -1.91
RTCAO00442 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.15□□□□□ -1.91
RTCAO00442 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.15□□□□□ -1.91
RTCAO00442 AL356321.1-201ENST00000621360 228 ntBASIC3.15□□□□□ -1.91
RTCAO00442 AC079597.1-201ENST00000624306 508 ntBASIC3.15□□□□□ -1.91
RTCAO00442 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.15□□□□□ -1.91
RTCAO00442 MIR3974-201ENST00000637126 96 ntBASIC3.15□□□□□ -1.91
RTCAO00442 U6.105-201ENST00000637379 88 ntBASIC3.15□□□□□ -1.91
RTCAO00442 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.15□□□□□ -1.91
RTCAO00442 DDX10P1-201ENST00000448545 1933 ntBASIC3.15□□□□□ -1.91
RTCAO00442 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RTCAO00442 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTCAO00442 AL049781.1-201ENST00000623195 3585 ntBASIC3.15□□□□□ -1.91
RTCAO00442 RNU1-33P-201ENST00000364249 162 ntBASIC3.14□□□□□ -1.91
RTCAO00442 RNU6-660P-201ENST00000364566 109 ntBASIC3.14□□□□□ -1.91
RTCAO00442 RNU6-1207P-201ENST00000384343 107 ntBASIC3.14□□□□□ -1.91
RTCAO00442 MIR183-201ENST00000384958 110 ntBASIC3.14□□□□□ -1.91
RTCAO00442 RNU6-754P-201ENST00000391166 107 ntBASIC3.14□□□□□ -1.91
RTCAO00442 FO393413.1-201ENST00000402892 195 ntBASIC3.14□□□□□ -1.91
RTCAO00442 AL356421.1-201ENST00000403255 413 ntBASIC3.14□□□□□ -1.91
RTCAO00442 AC063979.1-201ENST00000415539 377 ntBASIC3.14□□□□□ -1.91
RTCAO00442 AL358075.3-201ENST00000426289 226 ntBASIC3.14□□□□□ -1.91
RTCAO00442 AC097713.2-201ENST00000430199 356 ntBASIC3.14□□□□□ -1.91
RTCAO00442 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.14□□□□□ -1.91
RTCAO00442 ISCA1P2-201ENST00000438679 421 ntBASIC3.14□□□□□ -1.91
RTCAO00442 AL512286.1-201ENST00000439244 400 ntBASIC3.14□□□□□ -1.91
RTCAO00442 HMGB3P11-201ENST00000440127 604 ntBASIC3.14□□□□□ -1.91
RTCAO00442 UBBP3-201ENST00000445497 241 ntBASIC3.14□□□□□ -1.91
RTCAO00442 MTATP6P26-201ENST00000445926 662 ntBASIC3.14□□□□□ -1.91
RTCAO00442 VN1R34P-201ENST00000447387 883 ntBASIC3.14□□□□□ -1.91
RTCAO00442 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.14□□□□□ -1.91
RTCAO00442 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTCAO00442 BET1P1-201ENST00000482276 359 ntBASIC3.14□□□□□ -1.91
RTCAO00442 RPL21P13-201ENST00000488305 481 ntBASIC3.14□□□□□ -1.91
RTCAO00442 TTC39CP1-201ENST00000512513 755 ntBASIC3.14□□□□□ -1.91
RTCAO00442 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
RTCAO00442 ATP5F1P5-201ENST00000526403 760 ntBASIC3.14□□□□□ -1.91
RTCAO00442 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RTCAO00442 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.14□□□□□ -1.91
RTCAO00442 AL355836.1-201ENST00000555951 870 ntBASIC3.14□□□□□ -1.91
RTCAO00442 AL157394.1-201ENST00000562983 1224 ntBASIC3.14□□□□□ -1.91
RTCAO00442 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.14□□□□□ -1.91
RTCAO00442 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.14□□□□□ -1.91
RTCAO00442 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
RTCAO00442 PABPC1P9-201ENST00000426076 1612 ntBASIC3.14□□□□□ -1.91
RTCAO00442 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RTCAO00442 CR848007.1-201ENST00000442354 1699 ntBASIC3.14□□□□□ -1.91
RTCAO00442 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTCAO00442 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.13□□□□□ -1.91
RTCAO00442 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTCAO00442 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RTCAO00442 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RTCAO00442 RNU6-223P-201ENST00000362830 107 ntBASIC3.13□□□□□ -1.91
RTCAO00442 Y_RNA.97-201ENST00000363094 102 ntBASIC3.13□□□□□ -1.91
RTCAO00442 RNU6-501P-201ENST00000364072 100 ntBASIC3.13□□□□□ -1.91
RTCAO00442 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.13□□□□□ -1.91
RTCAO00442 Y_RNA.548-201ENST00000384656 105 ntBASIC3.13□□□□□ -1.91
RTCAO00442 MIR325-201ENST00000385260 98 ntBASIC3.13□□□□□ -1.91
RTCAO00442 MIR767-201ENST00000390228 109 ntBASIC3.13□□□□□ -1.91
RTCAO00442 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms