Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNU6-188P-201ENST00000364207 107 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXN3O00409 SNORA3.3-201ENST00000408712 125 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
FOXN3O00409 AC018630.2-202ENST00000422992 927 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXN3O00409 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXN3O00409 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXN3O00409 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXN3O00409 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXN3O00409 AL136097.1-201ENST00000456945 913 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXN3O00409 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXN3O00409 RN7SL323P-201ENST00000494712 295 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 AC116353.2-201ENST00000505332 712 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 HMGB3P15-201ENST00000507326 574 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.05□□□□□ -1.76
FOXN3O00409 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
FOXN3O00409 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXN3O00409 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.05□□□□□ -1.76
FOXN3O00409 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXN3O00409 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.05□□□□□ -1.76
FOXN3O00409 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXN3O00409 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.05□□□□□ -1.76
FOXN3O00409 AC007224.1-201ENST00000564410 144 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXN3O00409 AC105224.1-201ENST00000587055 421 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.05□□□□□ -1.76
FOXN3O00409 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.05□□□□□ -1.76
FOXN3O00409 DPPA3P3-201ENST00000603842 430 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 AL357078.3-201ENST00000607528 618 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
FOXN3O00409 MIR6875-201ENST00000617506 72 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 U6.42-201ENST00000618440 107 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXN3O00409 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXN3O00409 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
FOXN3O00409 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
FOXN3O00409 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
FOXN3O00409 ELF2P3-201ENST00000445099 1506 ntBASIC4.05□□□□□ -1.76
FOXN3O00409 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXN3O00409 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXN3O00409 AC007256.1-201ENST00000392253 2765 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXN3O00409 RNU6-511P-201ENST00000363496 107 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 DEFB109C-201ENST00000382575 264 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 DEFB109B-201ENST00000382656 264 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 Y_RNA.409-201ENST00000383990 98 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 RNU6-701P-201ENST00000384059 107 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 SNORA36C-201ENST00000384289 132 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 SNORD115-47-201ENST00000391226 86 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 AL359634.1-202ENST00000404721 284 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 PPIAP31-201ENST00000405422 495 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 SNORA11-201ENST00000408789 128 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXN3O00409 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXN3O00409 AC004975.1-201ENST00000428733 208 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 ARF4P2-201ENST00000430209 526 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 MTND1P2-201ENST00000430604 821 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 USP12PX-201ENST00000432383 1057 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 GPR143P-201ENST00000434155 205 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXN3O00409 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXN3O00409 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXN3O00409 AC068587.1-201ENST00000483613 781 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 AC026427.2-201ENST00000506228 536 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXN3O00409 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXN3O00409 NARSP2-201ENST00000518524 679 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXN3O00409 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXN3O00409 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXN3O00409 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXN3O00409 SYF2P1-201ENST00000550658 413 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 AL355836.1-201ENST00000555951 870 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 MIR548S-201ENST00000581352 82 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 AC006116.10-201ENST00000591836 581 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXN3O00409 AL592295.2-201ENST00000612578 206 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 MIR4275-201ENST00000636486 87 ntBASIC4.04□□□□□ -1.76
FOXN3O00409 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXN3O00409 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXN3O00409 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXN3O00409 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXN3O00409 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXN3O00409 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
FOXN3O00409 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXN3O00409 DEFB108F-201ENST00000344638 222 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 RNU4-12P-201ENST00000365233 139 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXN3O00409 Y_RNA.390-201ENST00000383932 102 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 MIR30B-201ENST00000384850 88 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 NDUFS5P1-201ENST00000405668 289 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 RNU2-9P-201ENST00000410194 145 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXN3O00409 MTATP6P30-201ENST00000443540 664 ntBASIC4.03□□□□□ -1.76
FOXN3O00409 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.03□□□□□ -1.76
FOXN3O00409 AC132479.1-201ENST00000449160 144 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms