Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC004866.2-201ENST00000438285 481 ntBASIC3.29□□□□□ -1.88
O00370 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.29□□□□□ -1.88
O00370 AC016696.1-201ENST00000446949 318 ntBASIC3.29□□□□□ -1.88
O00370 GAPDHP27-201ENST00000447427 1020 ntBASIC3.29□□□□□ -1.88
O00370 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.29□□□□□ -1.88
O00370 RPS27AP8-201ENST00000452665 445 ntBASIC3.29□□□□□ -1.88
O00370 AC034222.1-201ENST00000494052 532 ntBASIC3.29□□□□□ -1.88
O00370 DSTNP2-201ENST00000504533 515 ntBASIC3.29□□□□□ -1.88
O00370 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.29□□□□□ -1.88
O00370 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.29□□□□□ -1.88
O00370 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.29□□□□□ -1.88
O00370 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.29□□□□□ -1.88
O00370 MTND4LP18-201ENST00000526864 291 ntBASIC3.29□□□□□ -1.88
O00370 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.29□□□□□ -1.88
O00370 MIR5195-201ENST00000583555 115 ntBASIC3.29□□□□□ -1.88
O00370 AL353997.4-201ENST00000586196 166 ntBASIC3.29□□□□□ -1.88
O00370 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.29□□□□□ -1.88
O00370 AC012493.2-201ENST00000595083 291 ntBASIC3.29□□□□□ -1.88
O00370 AC011451.2-201ENST00000604303 598 ntBASIC3.29□□□□□ -1.88
O00370 AL031775.1-201ENST00000607014 887 ntBASIC3.29□□□□□ -1.88
O00370 AC091965.4-201ENST00000607691 587 ntBASIC3.29□□□□□ -1.88
O00370 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.29□□□□□ -1.88
O00370 AC099506.2-201ENST00000623074 221 ntBASIC3.29□□□□□ -1.88
O00370 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.29□□□□□ -1.88
O00370 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
O00370 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.29□□□□□ -1.88
O00370 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
O00370 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
O00370 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
O00370 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
O00370 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
O00370 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.28□□□□□ -1.88
O00370 RNA5SP374-201ENST00000362939 125 ntBASIC3.28□□□□□ -1.88
O00370 CD24P4-201ENST00000382840 243 ntBASIC3.28□□□□□ -1.88
O00370 SNORA54-201ENST00000384281 123 ntBASIC3.28□□□□□ -1.88
O00370 SNORD15B-201ENST00000384714 146 ntBASIC3.28□□□□□ -1.88
O00370 SNORA26.8-201ENST00000391306 124 ntBASIC3.28□□□□□ -1.88
O00370 AC110754.1-201ENST00000399740 601 ntBASIC3.28□□□□□ -1.88
O00370 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.28□□□□□ -1.88
O00370 RN7SKP266-201ENST00000410232 287 ntBASIC3.28□□□□□ -1.88
O00370 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.28□□□□□ -1.88
O00370 RPS27AP14-201ENST00000422868 454 ntBASIC3.28□□□□□ -1.88
O00370 RPL7P46-201ENST00000425129 740 ntBASIC3.28□□□□□ -1.88
O00370 AL445669.1-201ENST00000426743 755 ntBASIC3.28□□□□□ -1.88
O00370 DPPA2P1-201ENST00000428060 556 ntBASIC3.28□□□□□ -1.88
O00370 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.28□□□□□ -1.88
O00370 AL365184.2-201ENST00000431139 435 ntBASIC3.28□□□□□ -1.88
O00370 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 THAP5P1-201ENST00000439089 262 ntBASIC3.28□□□□□ -1.88
O00370 EPS15P1-201ENST00000448836 336 ntBASIC3.28□□□□□ -1.88
O00370 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 AC021382.1-201ENST00000483523 359 ntBASIC3.28□□□□□ -1.88
O00370 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 AC022447.3-201ENST00000506865 495 ntBASIC3.28□□□□□ -1.88
O00370 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.28□□□□□ -1.88
O00370 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 AC106038.2-201ENST00000520706 568 ntBASIC3.28□□□□□ -1.88
O00370 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.28□□□□□ -1.88
O00370 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 AL590229.1-201ENST00000603497 542 ntBASIC3.28□□□□□ -1.88
O00370 AC073114.1-201ENST00000612027 490 ntBASIC3.28□□□□□ -1.88
O00370 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.28□□□□□ -1.88
O00370 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.28□□□□□ -1.88
O00370 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.28□□□□□ -1.88
O00370 AC006927.3-201ENST00000638789 384 ntBASIC3.28□□□□□ -1.88
O00370 AC092125.1-201ENST00000562568 1995 ntBASIC3.28□□□□□ -1.88
O00370 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
O00370 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
O00370 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
O00370 AC090740.1-201ENST00000623193 2262 ntBASIC3.27□□□□□ -1.89
O00370 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
O00370 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
O00370 ELL2P3-201ENST00000457883 1602 ntBASIC3.27□□□□□ -1.89
O00370 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.27□□□□□ -1.89
O00370 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.27□□□□□ -1.89
O00370 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
O00370 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
O00370 AC073325.2-201ENST00000339545 159 ntBASIC3.27□□□□□ -1.89
O00370 RNU6-114P-201ENST00000384704 105 ntBASIC3.27□□□□□ -1.89
O00370 SNORD67-201ENST00000390833 111 ntBASIC3.27□□□□□ -1.89
O00370 RNA5SP344-201ENST00000411081 104 ntBASIC3.27□□□□□ -1.89
O00370 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.27□□□□□ -1.89
O00370 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.27□□□□□ -1.89
O00370 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.27□□□□□ -1.89
O00370 NPM1P11-201ENST00000417106 855 ntBASIC3.27□□□□□ -1.89
O00370 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.27□□□□□ -1.89
O00370 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.27□□□□□ -1.89
O00370 AL512649.1-201ENST00000428997 581 ntBASIC3.27□□□□□ -1.89
O00370 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.27□□□□□ -1.89
O00370 AC112653.1-201ENST00000443851 386 ntBASIC3.27□□□□□ -1.89
O00370 RPL7P36-201ENST00000444633 681 ntBASIC3.27□□□□□ -1.89
O00370 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.27□□□□□ -1.89
O00370 RAC1P7-201ENST00000445367 377 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms