Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
RNF223E7ERA6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF223E7ERA6 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF223E7ERA6 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF223E7ERA6 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF223E7ERA6 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF223E7ERA6 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF223E7ERA6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF223E7ERA6 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF223E7ERA6 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF223E7ERA6 AC093535.2-201ENST00000624769 2326 ntBASIC5.12□□□□□ -1.59
RNF223E7ERA6 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF223E7ERA6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF223E7ERA6 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF223E7ERA6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF223E7ERA6 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF223E7ERA6 AC012254.3-201ENST00000591183 2117 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 AC011455.2-201ENST00000599320 3336 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF223E7ERA6 U3.9-201ENST00000363823 204 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 RNU6-1082P-201ENST00000364574 107 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 AC068538.1-201ENST00000376856 336 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 MIR143-201ENST00000385300 106 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 RPL23AP17-201ENST00000401064 499 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 RNU2-50P-201ENST00000410494 143 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 AC096649.2-201ENST00000416186 393 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF223E7ERA6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 Y_RNA.685-201ENST00000516532 108 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 RNA5SP290-201ENST00000517133 127 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 AC009120.3-201ENST00000563335 499 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 MIR1273E-201ENST00000581165 102 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 OR7E18P-201ENST00000592589 702 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 MIR6719-201ENST00000622428 87 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.11□□□□□ -1.59
RNF223E7ERA6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF223E7ERA6 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF223E7ERA6 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF223E7ERA6 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 SNORD114-19-201ENST00000363072 75 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 SNORD58C-201ENST00000365223 64 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 RNU6-19P-201ENST00000384718 107 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 YPEL5P1-201ENST00000419731 367 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 OR2AM1P-201ENST00000422137 422 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 FTH1P6-201ENST00000430768 320 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AL049745.1-201ENST00000433953 286 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AL122020.1-201ENST00000472287 459 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 RPL23AP70-201ENST00000483361 460 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 RNU2-12P-201ENST00000517216 168 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 IGKV2-18-201ENST00000522607 343 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF223E7ERA6 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC006199.1-201ENST00000548728 219 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC020916.2-201ENST00000591242 360 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC010624.4-201ENST00000597606 1351 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC211433.2-201ENST00000608433 387 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC024581.2-201ENST00000619986 252 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RNF223E7ERA6 AC012640.5-201ENST00000623897 319 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 MIR1245B-201ENST00000636115 69 ntBASIC5.1□□□□□ -1.59
RNF223E7ERA6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms