Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AP001486.3-201ENST00000615334 372 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC018755.4-201ENST00000619715 454 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC068880.5-201ENST00000624331 290 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC097655.1-201ENST00000635075 318 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 FAM157B-203ENST00000639350 358 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AC099063.3-201ENST00000642066 185 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AP000560.1-201ENST00000624150 1937 ntBASIC1.07□□□□□ -2.24
CPSF4LA6NMK7 AL356473.1-201ENST00000406203 1408 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 SNORA38-201ENST00000363946 132 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 AL356320.2-201ENST00000417263 507 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 RPL21P32-201ENST00000419877 477 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 MTCYBP24-201ENST00000420387 1106 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 RPL7P30-201ENST00000420888 709 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 RPL23AP16-201ENST00000441715 421 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 TPMTP4-201ENST00000450749 678 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 snoU13.4-201ENST00000458916 104 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 RNU7-27P-201ENST00000459281 62 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 SYPL1P1-201ENST00000473622 768 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 AC096751.1-202ENST00000502691 1067 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 SNORA31.20-201ENST00000517111 133 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 AC022634.1-201ENST00000520765 532 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 AC087272.1-201ENST00000523624 533 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 AC010546.1-201ENST00000569391 485 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 AC084373.1-201ENST00000603311 235 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.06□□□□□ -2.24
CPSF4LA6NMK7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 SNORA11.2-201ENST00000408318 127 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 RNA5SP270-201ENST00000411361 118 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 MTCYBP7-201ENST00000419540 1134 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AC108667.1-201ENST00000428618 249 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 MTND2P8-201ENST00000450555 1025 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 snoU13.23-201ENST00000458863 104 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AC093852.1-201ENST00000503587 266 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 NDUFB4P2-201ENST00000509515 391 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AC004062.1-201ENST00000509926 645 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 MTND2P26-201ENST00000528255 1029 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AC128687.1-201ENST00000605304 619 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AC004908.2-201ENST00000609090 574 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AL627230.6-201ENST00000611129 280 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AL157834.3-201ENST00000615543 103 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AC003001.2-201ENST00000616294 831 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 uc_338.12-201ENST00000616344 181 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 U73479.1-201ENST00000618062 168 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AL353997.5-201ENST00000618886 171 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 AC109809.1-201ENST00000619665 545 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 ADAM3A-203ENST00000461344 2157 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 ZNF37BP-203ENST00000452306 1352 ntBASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
CPSF4LA6NMK7 WWP1P1-201ENST00000466609 2769 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 RNU6-532P-201ENST00000384318 107 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 RNU6-193P-201ENST00000410977 107 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 OR6C66P-201ENST00000414917 930 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 UBE2FP1-201ENST00000416536 447 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC003685.2-201ENST00000422795 395 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC007560.1-201ENST00000426912 237 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 FABP5P3-201ENST00000437960 408 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 PMCHL2-203ENST00000457791 237 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 RNU1-98P-201ENST00000458992 160 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 CABYRP1-201ENST00000465493 1045 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC140059.1-201ENST00000489238 361 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 RNU7-193P-201ENST00000516723 65 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 BTF3P12-201ENST00000519620 469 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC087441.2-201ENST00000529141 262 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 RPS3AP4-201ENST00000555161 764 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC015712.3-201ENST00000559380 164 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC023824.2-201ENST00000566185 400 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC115085.1-201ENST00000588924 229 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC126118.1-201ENST00000607744 628 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 MIR6864-201ENST00000617935 70 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AL353770.2-201ENST00000620024 78 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AC095031.1-201ENST00000623685 672 ntBASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CPSF4LA6NMK7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms