Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC0.86□□□□□ -2.27
LINC01549A6NIU2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.86□□□□□ -2.27
LINC01549A6NIU2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
LINC01549A6NIU2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC0.86□□□□□ -2.27
LINC01549A6NIU2 RNA5SP165-201ENST00000517142 115 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC0.86□□□□□ -2.27
LINC01549A6NIU2 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.86□□□□□ -2.27
LINC01549A6NIU2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.86□□□□□ -2.27
LINC01549A6NIU2 CBX3P2-202ENST00000583365 535 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 AC103810.9-201ENST00000606688 112 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 AC007038.2-201ENST00000608095 740 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.86□□□□□ -2.27
LINC01549A6NIU2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 MIR26B-201ENST00000362251 77 ntBASIC0.85□□□□□ -2.27
LINC01549A6NIU2 RSL24D1P4-201ENST00000400938 484 ntBASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AC025181.1-201ENST00000477507 416 ntBASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AC009318.2-201ENST00000610917 651 ntBASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AL773524.1-201ENST00000614065 229 ntBASIC0.85□□□□□ -2.27
LINC01549A6NIU2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 AP005901.5-201ENST00000545779 1796 ntBASIC0.85□□□□□ -2.27
LINC01549A6NIU2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
LINC01549A6NIU2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
LINC01549A6NIU2 ZNF209P-201ENST00000593450 2304 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC087359.1-201ENST00000508335 1740 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 RNU6-1159P-201ENST00000362933 107 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 RNA5SP391-201ENST00000363456 119 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 SNORD14B-201ENST00000364533 90 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 SNORA22-201ENST00000383907 134 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 SNORA22C-201ENST00000384614 134 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 MIR320B1-201ENST00000390209 79 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 SNORA40.6-201ENST00000391153 128 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 RNU2-21P-201ENST00000410368 188 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC0.84□□□□□ -2.27
LINC01549A6NIU2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.84□□□□□ -2.27
LINC01549A6NIU2 SFR1P2-201ENST00000421841 730 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.84□□□□□ -2.27
LINC01549A6NIU2 MTND5P25-201ENST00000430499 799 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC236972.1-201ENST00000433225 199 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.84□□□□□ -2.27
LINC01549A6NIU2 RPL21P134-201ENST00000453468 483 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 SUMO2P2-201ENST00000456482 255 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AL672167.3-201ENST00000465951 960 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC068781.1-201ENST00000488231 618 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC114801.2-201ENST00000503825 781 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC024224.1-201ENST00000538284 609 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC103987.3-201ENST00000582071 292 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 MIR3660-201ENST00000584845 100 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 NRBF2P1-201ENST00000587407 859 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 SEPT7P9-203ENST00000604116 343 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC073413.2-201ENST00000604332 360 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC0.84□□□□□ -2.27
LINC01549A6NIU2 AC103710.4-201ENST00000609301 899 ntBASIC0.84□□□□□ -2.27
LINC01549A6NIU2 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
LINC01549A6NIU2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
LINC01549A6NIU2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
LINC01549A6NIU2 MIR208A-201ENST00000362287 71 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 RNU4-13P-201ENST00000364019 141 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 SNORA62.1-201ENST00000364287 154 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 SNORA26.9-201ENST00000391322 122 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 RNA5SP498-201ENST00000411342 120 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 RPL23AP36-201ENST00000413895 458 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AL158823.1-201ENST00000418441 478 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC0.83□□□□□ -2.28
LINC01549A6NIU2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AC016691.1-201ENST00000441321 413 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.83□□□□□ -2.28
LINC01549A6NIU2 TPMTP4-201ENST00000450749 678 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 UBL5P3-201ENST00000475112 231 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AP000926.3-201ENST00000497201 299 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AC069306.1-201ENST00000507006 843 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AC108043.1-201ENST00000512696 574 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AC027309.2-201ENST00000520566 192 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 YWHAZP1-201ENST00000556286 722 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.83□□□□□ -2.28
LINC01549A6NIU2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.83□□□□□ -2.28
LINC01549A6NIU2 SUB1P3-201ENST00000564581 315 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AC015720.1-201ENST00000565251 277 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AC011471.1-201ENST00000585766 187 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 MTCO3P22-201ENST00000603219 784 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 MIR6845-201ENST00000613182 61 ntBASIC0.83□□□□□ -2.28
LINC01549A6NIU2 AP003476.1-201ENST00000623984 516 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms