Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AL592114.1-201ENST00000403842 483 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AL121834.1-202ENST00000404494 277 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 RN7SKP16-201ENST00000410180 299 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 RNU6-628P-201ENST00000410675 107 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 MTND3P8-201ENST00000412909 339 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AL645937.1-202ENST00000421799 937 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AL451062.2-201ENST00000427515 271 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 TAAR7P-201ENST00000436141 242 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 HMGB3P11-201ENST00000440127 604 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 TXNP1-201ENST00000441872 371 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 DHFRP3-201ENST00000455595 559 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC034236.1-201ENST00000469891 373 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 RNU6-1256P-201ENST00000516539 103 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 RN7SKP256-201ENST00000517201 314 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 AC015813.6-201ENST00000624409 5808 ntBASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
CCDC163A0A0D9SF12 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AC116096.1-201ENST00000566804 2314 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 CPHL1P-201ENST00000461341 3407 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 UBE2L2-201ENST00000254302 429 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 RNU6-50P-201ENST00000362356 103 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 Y_RNA.11-201ENST00000362375 109 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 Y_RNA.100-201ENST00000363141 102 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 RNU6-512P-201ENST00000364438 103 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 RNA5SP219-201ENST00000390940 113 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 RNU6-817P-201ENST00000391083 104 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 MTCO3P46-201ENST00000425787 232 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AL132765.1-201ENST00000434165 553 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 RPS15AP27-201ENST00000449183 343 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 HMGN2P7-201ENST00000456186 273 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 SNORA67.7-201ENST00000516664 135 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 SCOCP1-201ENST00000554676 349 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 MIR4742-201ENST00000581069 85 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AC106900.2-201ENST00000604994 317 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 CTHRC1P1-201ENST00000605383 469 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 MIR15A-201ENST00000607334 83 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 TPTEP1-208ENST00000636884 213 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 AF127577.6-201ENST00000623352 2191 ntBASIC4.5□□□□□ -1.69
CCDC163A0A0D9SF12 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 RNU6-831P-201ENST00000384548 107 ntBASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 RNU6-1127P-201ENST00000384580 107 ntBASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 MIR3065-201ENST00000390137 79 ntBASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 RPS4XP7-201ENST00000406274 780 ntBASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 RNA5SP129-201ENST00000410276 118 ntBASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 RN7SKP202-201ENST00000410439 330 ntBASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 AL139095.3-201ENST00000419672 1203 ntBASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC163A0A0D9SF12 AC091390.3-201ENST00000426478 338 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms