Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 VPS26BP1-201ENST00000417155 755 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 UBE2D3P2-201ENST00000424409 445 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 RPL7P46-201ENST00000425129 740 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 OR4K11P-201ENST00000431829 904 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 RPL21P2-201ENST00000440049 481 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 RAC1P7-201ENST00000445367 377 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 HMGN2P16-201ENST00000456802 261 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 snoU109.4-201ENST00000458953 143 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-714P-201ENST00000516963 103 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 UBTFL10-201ENST00000528532 562 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AC023050.2-201ENST00000544968 387 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AL022099.1-201ENST00000604551 712 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AC005046.1-201ENST00000608515 625 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AC103710.4-201ENST00000609301 899 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AL590282.1-201ENST00000610379 1136 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AL590099.1-201ENST00000615276 138 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AL596245.1-201ENST00000618994 362 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AL356585.4-201ENST00000623078 1229 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 AP000770.2-201ENST00000623694 100 ntBASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV40A0A0B4J280 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC097714.1-201ENST00000511272 1647 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 RPL21P132-201ENST00000331267 462 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 RNA5SP189-201ENST00000364920 115 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 RNA5SP126-201ENST00000365092 109 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-744P-201ENST00000365557 107 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-1316P-201ENST00000384242 108 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL356131.1-201ENST00000405826 414 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 RNU2-37P-201ENST00000410695 177 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL022400.1-201ENST00000423946 935 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 MTCO1P39-201ENST00000426148 480 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 RPL21P112-201ENST00000434403 463 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 SETP8-201ENST00000435341 628 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 UBE2D3P1-201ENST00000436669 444 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 LARP1BP3-201ENST00000437229 869 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL008629.1-201ENST00000438615 184 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 SDCBPP1-201ENST00000440192 890 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 MTCYBP3-201ENST00000445588 1137 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL513328.1-201ENST00000446460 224 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL109741.2-201ENST00000455561 343 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 ANKRD26P4-201ENST00000455755 950 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL590639.1-201ENST00000456484 337 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 RPS3P1-201ENST00000456781 192 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC104685.1-201ENST00000502445 371 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC010625.1-201ENST00000511296 403 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 RNU6-1129P-201ENST00000515964 104 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 RNA5SP148-201ENST00000516527 94 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AP003497.1-201ENST00000528472 562 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 SNRPGP16-201ENST00000533275 226 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL133271.1-201ENST00000538229 291 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 CR383656.7-201ENST00000548164 174 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 ELOCP32-201ENST00000548625 324 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL391156.1-201ENST00000554965 554 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 FAM60BP-201ENST00000578364 658 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 UBE2L4-201ENST00000587688 464 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC010738.1-201ENST00000604970 987 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AC097468.3-201ENST00000607956 456 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.14□□□□□ -2.07
TRAV40A0A0B4J280 AL158801.5-201ENST00000623123 465 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms