Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAV25A0A0B4J276 MIR6733-201ENST00000635723 61 ntBASIC2.29□□□□□ -2.04
TRAV25A0A0B4J276 MIR203B-201ENST00000636080 86 ntBASIC2.29□□□□□ -2.04
TRAV25A0A0B4J276 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV25A0A0B4J276 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV25A0A0B4J276 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.29□□□□□ -2.04
TRAV25A0A0B4J276 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
TRAV25A0A0B4J276 ZNF271P-202ENST00000465539 1970 ntBASIC2.29□□□□□ -2.04
TRAV25A0A0B4J276 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC096644.4-201ENST00000563417 2912 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AL390862.1-201ENST00000635467 1469 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC131280.1-202ENST00000624067 4211 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 RNU6-343P-201ENST00000364709 104 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 SNORA9-201ENST00000384215 133 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 RNU6-114P-201ENST00000384704 105 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 MIR483-201ENST00000385070 76 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AL590084.1-201ENST00000407885 387 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 NDUFS5P4-201ENST00000412983 318 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC007560.1-201ENST00000426912 237 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AL162389.1-201ENST00000449233 177 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC135721.1-201ENST00000497954 479 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC083906.5-201ENST00000503722 328 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC113347.3-201ENST00000509113 148 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC098591.2-201ENST00000510152 315 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 HMGB3P3-201ENST00000510526 400 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC008885.1-201ENST00000514930 301 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 RNA5SP290-201ENST00000517133 127 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AP003497.1-201ENST00000528472 562 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC005832.3-201ENST00000537929 631 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AL132657.2-201ENST00000564417 358 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AP000403.1-201ENST00000603349 851 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC093673.2-201ENST00000609674 331 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC009237.15-201ENST00000610252 501 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 RNU6-1192P-201ENST00000612197 107 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 RNU6-489P-201ENST00000618289 107 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC007998.5-201ENST00000622938 237 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AP003476.1-201ENST00000623984 516 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 CU459211.1-201ENST00000635667 749 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 MIR7157-201ENST00000635801 60 ntBASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.28□□□□□ -2.04
TRAV25A0A0B4J276 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.28□□□□□ -2.05
TRAV25A0A0B4J276 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC110491.1-201ENST00000562191 2010 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 U3.6-201ENST00000363622 211 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 RNU6-432P-201ENST00000384196 109 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 RNU6-220P-201ENST00000390919 107 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC022018.1-201ENST00000430685 241 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC011242.1-201ENST00000433596 1158 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 RNA5SP341-201ENST00000516261 117 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC007151.1-201ENST00000572774 483 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 OR4K7P-201ENST00000580232 945 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 MIR3605-201ENST00000583214 100 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AL158211.2-201ENST00000607282 395 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC093732.2-201ENST00000607950 274 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC100793.4-201ENST00000613683 429 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 TUG1_2.1-201ENST00000614234 87 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC245884.12-201ENST00000615364 59 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AC010889.1-201ENST00000566193 2666 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 AL353743.1-202ENST00000431724 1695 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 ELF2P3-201ENST00000445099 1506 ntBASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
TRAV25A0A0B4J276 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
TRAV25A0A0B4J276 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms