Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC099677.1-201ENST00000420575 175 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 Z80107.1-201ENST00000436830 412 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AL714022.1-201ENST00000439897 151 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC016691.1-201ENST00000441321 413 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 RPL23AP6-201ENST00000446637 472 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 Z82190.1-201ENST00000454534 490 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC116337.2-201ENST00000477662 156 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 ANXA2P1-201ENST00000505539 926 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC104108.1-201ENST00000509930 412 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC008494.2-201ENST00000514544 370 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 MTCYBP23-201ENST00000558717 1102 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 LINC00933-203ENST00000559812 219 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC003001.2-201ENST00000616294 831 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AC109454.4-201ENST00000623411 649 ntBASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TRAV30A0A087WSZ9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 SNORA23-201ENST00000365128 182 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 MIR583-201ENST00000384846 75 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 CISD1P1-201ENST00000393907 327 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AC068050.1-201ENST00000394891 380 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 CYCSP45-201ENST00000402289 315 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 MIR1294-201ENST00000408503 142 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AC010881.1-201ENST00000433830 235 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AC023512.1-201ENST00000444513 499 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AL360221.1-201ENST00000445989 335 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 DNAJC19P8-201ENST00000452887 259 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 RPL21P134-201ENST00000453468 483 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 UBE2DNL-203ENST00000474922 222 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AC107032.1-201ENST00000485945 480 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 PCNAP1-201ENST00000505363 709 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 HMGB1P47-201ENST00000511281 589 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 SNORA70.16-201ENST00000516390 95 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 SCARNA11.3-201ENST00000517276 130 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AC005021.1-201ENST00000608730 355 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 AP003399.1-201ENST00000637534 361 ntBASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV30A0A087WSZ9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 RNA5SP276-201ENST00000362580 94 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 RNU6-989P-201ENST00000362756 107 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 RNU6-712P-201ENST00000410558 100 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 VN1R36P-201ENST00000414936 291 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 FABP5P3-201ENST00000437960 408 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 RPL7P54-201ENST00000438336 674 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 RPL31P53-201ENST00000457065 348 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC025181.1-201ENST00000477507 416 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC109471.1-201ENST00000511631 612 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 RANP3-201ENST00000530970 276 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC110588.1-201ENST00000559699 137 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AL354943.1-201ENST00000572103 781 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC104581.2-201ENST00000572227 430 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC243960.4-201ENST00000600532 288 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 BNIP3P19-201ENST00000605397 577 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC007038.2-201ENST00000608095 740 ntBASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV30A0A087WSZ9 AC010329.5-201ENST00000623497 2174 ntBASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 RNU6-1159P-201ENST00000362933 107 ntBASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 RNU1-148P-201ENST00000384472 162 ntBASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 RNU6-19P-201ENST00000384718 107 ntBASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 RN7SKP51-201ENST00000410781 304 ntBASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 AL133384.1-201ENST00000412744 351 ntBASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 GTF2IP20-201ENST00000431663 360 ntBASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 AL645568.3-201ENST00000433683 316 ntBASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 AC092573.2-201ENST00000434546 243 ntBASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV30A0A087WSZ9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms