Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 AC097484.1-201ENST00000471148 389 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 MIR892C-201ENST00000516410 77 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 RN7SKP272-201ENST00000516988 232 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 MIR3934-201ENST00000579806 107 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 MIR6820-201ENST00000611508 62 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 AC091953.3-201ENST00000623220 236 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 NEK3-211ENST00000629912 141 ntTSL 5 BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 AC107980.1-201ENST00000558671 3355 ntBASIC7.34□□□□□ -1.23
CCDC61Q9Y6R9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.24
CCDC61Q9Y6R9 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.24
CCDC61Q9Y6R9 AC015799.1-201ENST00000622996 3122 ntBASIC7.34□□□□□ -1.24
CCDC61Q9Y6R9 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 U3.3-201ENST00000362986 216 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-275P-201ENST00000364910 107 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 Y_RNA.369-201ENST00000365568 117 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-376P-201ENST00000384731 106 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 MIR105-1-201ENST00000385222 81 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 AL078599.1-201ENST00000402075 293 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 AF186996.5-201ENST00000418098 904 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 AL049745.1-201ENST00000433953 286 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 RPS15AP7-201ENST00000439294 405 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 RANP8-201ENST00000444720 713 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 RPS15AP34-201ENST00000487776 387 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-589P-201ENST00000516485 107 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 CR383656.7-201ENST00000548164 174 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 RPL23AP88-201ENST00000605759 454 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 MAPK10-338ENST00000641647 3362 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 AC114774.1-201ENST00000507410 1770 ntBASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC61Q9Y6R9 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 PROS2P-201ENST00000474651 1951 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-899P-201ENST00000363947 107 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 Y_RNA.570-201ENST00000384750 101 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 LAP3P1-201ENST00000403648 294 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 AC009237.7-201ENST00000447357 229 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 MTATP6P7-201ENST00000453315 681 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 RN7SKP258-201ENST00000517151 304 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 DEFB131C-201ENST00000528817 165 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 AC087783.2-201ENST00000605070 562 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 AC020656.2-201ENST00000613291 5309 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 INTS6P1-201ENST00000504674 2530 ntBASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC61Q9Y6R9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AC006206.1-201ENST00000544842 3387 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AC083899.1-201ENST00000454465 3819 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 AC139769.1-204ENST00000472297 1931 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-222P-201ENST00000362438 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-37P-201ENST00000362692 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 Y_RNA.123-201ENST00000363338 102 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-11P-201ENST00000364234 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-7-201ENST00000364784 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-8-201ENST00000365467 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-25P-201ENST00000383873 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-1-201ENST00000383898 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-36P-201ENST00000384172 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-4P-201ENST00000384205 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-5P-201ENST00000384238 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-3P-201ENST00000384314 107 ntBASIC7.31□□□□□ -1.24
CCDC61Q9Y6R9 RNU6-16P-201ENST00000384385 107 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms