Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC114755.5-201ENST00000447760 831 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 HMGB3P30-201ENST00000457863 606 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 RNU7-182P-201ENST00000459009 62 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 MRPS17P3-201ENST00000465453 385 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 GMFBP1-201ENST00000467831 427 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AC078785.3-201ENST00000476607 425 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 RN7SL432P-201ENST00000484057 298 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AC105137.1-201ENST00000484355 562 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AC078817.1-201ENST00000492623 435 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 NIPA2P2-201ENST00000496376 1083 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 KLHL2P1-201ENST00000508691 521 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AP003730.1-201ENST00000524605 285 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AF235103.2-201ENST00000525753 346 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 OR4H12P-201ENST00000556269 907 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 MIR4775-201ENST00000581168 75 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 IPO5P1-202ENST00000600039 287 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 DISC2.1-201ENST00000612827 205 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AP001486.2-201ENST00000561652 5113 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 CASC19-280ENST00000642102 1351 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 NCAPGP1-201ENST00000505112 1814 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC126755.2-208ENST00000327792 462 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC138969.1-213ENST00000331436 462 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 RNU5E-4P-201ENST00000364931 120 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 RNU6-996P-201ENST00000365438 107 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 MT-TL1-201ENST00000386347 75 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AL591416.1-201ENST00000404015 867 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AL354719.1-201ENST00000406535 843 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC108032.1-201ENST00000416706 207 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 DUTP6-201ENST00000425573 462 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 CYCSP43-201ENST00000438233 310 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 RPL26P6-201ENST00000440913 438 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 CACYBPP2-201ENST00000453625 678 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC006512.1-201ENST00000468816 291 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC026979.1-201ENST00000492525 396 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 MTCYBP18-201ENST00000501056 747 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 VN1R104P-201ENST00000505115 1009 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 SNORA20.3-201ENST00000516880 132 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 YPEL5P3-201ENST00000547227 352 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 CBX3P5-201ENST00000552017 521 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AL049634.3-201ENST00000604968 457 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC130324.3-201ENST00000614165 542 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AL731566.2-201ENST00000618971 317 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 uc_338.11-201ENST00000619132 160 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC092794.2-201ENST00000620933 563 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 AC024940.5-201ENST00000622889 474 ntBASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PCDHA3Q9Y5H8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 HLFP1-201ENST00000402375 499 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 TOMM22P1-201ENST00000418578 312 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 CYP4F29P-201ENST00000420685 446 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 RPL21P109-201ENST00000422213 475 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC091390.1-201ENST00000433904 331 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC024082.2-201ENST00000434771 238 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC010285.1-201ENST00000470580 392 ntBASIC4.11□□□□□ -1.75
PCDHA3Q9Y5H8 AC233702.1-201ENST00000482905 502 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms