Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 AC104564.1-201ENST00000493028 407 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 MIR4255-201ENST00000579351 72 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 AC093673.2-201ENST00000609674 331 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 AC103710.2-201ENST00000609912 942 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.38□□□□□ -2.19
AP4S1Q9Y587 MTND4P31-201ENST00000425607 1343 ntBASIC1.38□□□□□ -2.19
AP4S1Q9Y587 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 RNU4-82P-201ENST00000362443 140 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 MIR583-201ENST00000384846 75 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 RNU6-220P-201ENST00000390919 107 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 HMGB3P31-201ENST00000413333 595 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 OFD1P18Y-201ENST00000420889 959 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 EEF1B2P7-201ENST00000451177 676 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 MTCO1P42-201ENST00000457379 726 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 DYNLL1P5-201ENST00000467158 270 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AC068781.1-201ENST00000488231 618 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AC118465.1-201ENST00000513820 1271 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 SNORA31.13-201ENST00000516624 135 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 MIR4299-201ENST00000577899 72 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AC091304.6-201ENST00000619761 202 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AC011330.2-201ENST00000621680 635 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AC027309.3-201ENST00000623419 351 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 AC064859.1-201ENST00000624741 174 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 IGHVIII-44-202ENST00000636235 289 ntBASIC1.37□□□□□ -2.19
AP4S1Q9Y587 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
AP4S1Q9Y587 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AL356473.1-201ENST00000406203 1408 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 RPS15AP38-201ENST00000413110 372 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AL358453.1-201ENST00000422522 250 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 HMGB1P18-201ENST00000438801 619 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 RPL23AP3-201ENST00000453844 468 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 MLLT10P2-201ENST00000506434 249 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AC093770.1-201ENST00000511559 571 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AC008549.1-201ENST00000512900 643 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AC008269.2-201ENST00000561915 1105 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 MIR4285-201ENST00000581001 85 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AC135507.1-201ENST00000607214 561 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 U6.48-201ENST00000618523 106 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AL590808.1-201ENST00000618696 141 ntBASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.36□□□□□ -2.19
AP4S1Q9Y587 AL512604.1-201ENST00000404812 257 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 RNA5SP270-201ENST00000411361 118 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.35□□□□□ -2.19
AP4S1Q9Y587 EIF4EP4-201ENST00000424916 578 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.35□□□□□ -2.19
AP4S1Q9Y587 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AC236972.1-201ENST00000433225 199 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AC090774.1-201ENST00000435925 246 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 GTF2IP7-202ENST00000436677 309 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AC098862.1-201ENST00000504991 413 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AC023141.11-201ENST00000508864 202 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AP005639.2-201ENST00000527592 928 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.35□□□□□ -2.19
AP4S1Q9Y587 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AC010678.1-201ENST00000614118 713 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AL513185.3-201ENST00000433335 1300 ntBASIC1.35□□□□□ -2.19
AP4S1Q9Y587 AC080128.1-201ENST00000474389 1917 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 RNA5SP276-201ENST00000362580 94 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 OR9R1P-201ENST00000412200 877 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AL161449.1-201ENST00000414531 1199 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AC098614.2-201ENST00000426040 255 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AC006548.1-201ENST00000427470 102 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AC015922.2-201ENST00000435593 184 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 NDUFB4P6-201ENST00000436819 366 ntBASIC1.34□□□□□ -2.19
AP4S1Q9Y587 AL121601.2-201ENST00000438019 707 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms