Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC012213.3-201ENST00000577199 777 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC006254.3-201ENST00000603353 884 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AL034351.1-201ENST00000605288 668 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC084782.3-201ENST00000612282 578 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC100793.4-201ENST00000613683 429 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC138932.5-201ENST00000617759 563 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AL353748.2-201ENST00000622148 471 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC010149.2-201ENST00000637608 315 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AC099654.13-201ENST00000639774 207 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 AF127577.6-201ENST00000623352 2191 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
YIPF1Q9Y548 MTCO1P9-201ENST00000505577 1534 ntBASIC3.39□□□□□ -1.87
YIPF1Q9Y548 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 USP8P1-201ENST00000494673 3183 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AL122016.1-201ENST00000403365 367 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 HSPE1P26-201ENST00000405341 275 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 FCF1P10-201ENST00000407590 479 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 RPS3AP3-201ENST00000411933 242 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 EI24P1-201ENST00000416584 867 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AL049734.2-201ENST00000441066 616 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 RPL23AP62-201ENST00000463396 453 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 S100A11P2-201ENST00000467589 312 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 LARP1BP2-201ENST00000486594 519 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC020893.1-201ENST00000502452 580 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC096751.1-202ENST00000502691 1067 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 NDUFB4P2-201ENST00000509515 391 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 RNU1-103P-201ENST00000516502 125 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC022616.6-201ENST00000520479 119 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC103783.1-201ENST00000520506 373 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 RPL21P5-201ENST00000554662 472 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AL356432.3-201ENST00000568952 465 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 MIR4528-201ENST00000577763 90 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 MTND1P15-201ENST00000579262 949 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 HMGN1P30-201ENST00000589286 268 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AP001429.1-201ENST00000602568 530 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC068790.3-201ENST00000602988 553 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AL139286.2-201ENST00000606838 396 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC108747.1-201ENST00000609508 535 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC018692.3-201ENST00000623929 123 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC048347.1-201ENST00000624621 427 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AL159972.1-201ENST00000625150 448 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 AC004925.1-201ENST00000624256 2706 ntBASIC3.38□□□□□ -1.87
YIPF1Q9Y548 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
YIPF1Q9Y548 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 SNORA7.4-201ENST00000384249 137 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 RNU6-1119P-201ENST00000384349 108 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AC233728.2-201ENST00000425348 757 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AL353777.1-201ENST00000425552 326 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 USP9YP14-201ENST00000430663 563 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 FTH1P1-201ENST00000437933 532 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 TPT1P14-201ENST00000448018 505 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 MTND1P27-201ENST00000451117 902 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 snoU109.1-201ENST00000459339 135 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 MTND1P3-201ENST00000484956 952 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 MIR2276-201ENST00000516886 89 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AP003467.2-201ENST00000520175 319 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AC109635.4-202ENST00000531666 412 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 OR4T1P-201ENST00000554933 911 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AGGF1P4-201ENST00000568249 801 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AC137800.2-201ENST00000574375 120 ntBASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.37□□□□□ -1.87
YIPF1Q9Y548 AL451007.1-201ENST00000595491 289 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms