Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 IGLVIV-53-201ENST00000520107 367 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 TVP23BP1-201ENST00000557500 617 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 MIR4286-201ENST00000580651 93 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 RN7SL600P-201ENST00000581811 299 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 FAM157A-202ENST00000615155 405 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 MIR6891-201ENST00000618788 93 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 AC091925.2-201ENST00000625059 256 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RTCBQ9Y3I0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RTCBQ9Y3I0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
RTCBQ9Y3I0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 SNORA63.7-201ENST00000365579 123 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 AC009237.10-201ENST00000414112 510 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 HMGB3P21-201ENST00000452483 547 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 RPS27AP1-201ENST00000475545 471 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 TRBV1-201ENST00000476502 284 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 RN7SL691P-201ENST00000494487 301 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 RPS27AP13-201ENST00000498403 237 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 RNU6-635P-201ENST00000516651 102 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 RNA5SP143-201ENST00000516936 115 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 CYCSP40-201ENST00000575927 294 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 MIR3941-201ENST00000582572 103 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 AL451044.1-201ENST00000604867 238 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 AC112200.1-201ENST00000625015 234 ntBASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTCBQ9Y3I0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 RNA5SP513-201ENST00000364648 118 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 Y_RNA.556-201ENST00000384677 113 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 SNORA75.6-201ENST00000391318 127 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 RN7SKP159-201ENST00000410657 292 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 RPL31P2-201ENST00000413849 377 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 EIF4HP2-201ENST00000424380 563 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 RPL7P2-201ENST00000427639 268 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 RPL21P112-201ENST00000434403 463 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AL358232.1-201ENST00000448030 501 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 DYNLL1P5-201ENST00000467158 270 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AC010655.3-201ENST00000478818 450 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 RNU6-27P-201ENST00000516146 107 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 HMGN1P28-201ENST00000521340 364 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AL121576.1-201ENST00000556055 276 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AC008521.1-201ENST00000587471 187 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 ATP1B3P1-201ENST00000605365 821 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AC009229.3-201ENST00000608056 282 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 U2.17-201ENST00000611454 95 ntBASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RTCBQ9Y3I0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 XIAPP3-201ENST00000312918 795 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 RNU6-1284P-201ENST00000363701 100 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 RNU6-128P-201ENST00000383976 107 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 SNORD51-201ENST00000384320 80 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 RNU6-754P-201ENST00000391166 107 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 AL109755.1-201ENST00000401791 649 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 RNU6-1050P-201ENST00000410388 107 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 RNA5SP44-201ENST00000410446 133 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 CYCSP19-201ENST00000411715 316 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 HMGN2P27-201ENST00000427352 270 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 AC093106.2-201ENST00000428212 385 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 HMGB1P12-201ENST00000438594 598 ntBASIC5.62□□□□□ -1.51
RTCBQ9Y3I0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms