Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MIR221-201ENST00000385135 110 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AL035405.1-201ENST00000400795 710 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AL133264.1-201ENST00000407157 562 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 SPA17P1-201ENST00000416656 452 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC099548.1-201ENST00000421443 426 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 ZDHHC20P2-201ENST00000424108 429 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC098614.2-201ENST00000426040 255 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 RPS15AP27-201ENST00000449183 343 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 RPL7P55-201ENST00000450522 746 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC092155.2-201ENST00000454675 477 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 SNORA59A-201ENST00000459326 152 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 XACT-201ENST00000468762 497 ntTSL 5 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC107626.1-201ENST00000471084 183 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 GTF2IP9-201ENST00000502460 301 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC091860.1-201ENST00000505723 432 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 TTC39CP1-201ENST00000512513 755 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 MRPS36P2-201ENST00000512569 299 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 SNORA48.10-201ENST00000516965 160 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 SUB1P1-201ENST00000524415 382 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 TRAV28-201ENST00000557548 323 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 MIR4666A-201ENST00000580160 79 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 MIR3117-201ENST00000584034 78 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 VN1R78P-201ENST00000597393 564 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AP002906.1-201ENST00000603405 233 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 TUG1_1.1-201ENST00000610654 145 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC073308.1-201ENST00000623696 305 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC010149.2-201ENST00000637608 315 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 AC006020.1-201ENST00000420179 1854 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 CKAP2P1-201ENST00000555477 2049 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 ANKRD26P2-201ENST00000445530 1710 ntBASIC2□□□□□ -2.09
HDGFL3Q9Y3E1 MTND4P21-201ENST00000453886 1357 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 XGY1-201ENST00000381172 446 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 OR5H15-201ENST00000383696 930 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 RNU1-52P-201ENST00000384190 164 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 RNU6-549P-201ENST00000384433 107 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AL445529.1-201ENST00000398713 389 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 Z85995.1-201ENST00000415547 335 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AL512661.1-201ENST00000434586 1253 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 MTND4LP3-201ENST00000468320 276 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AC004263.1-201ENST00000479327 332 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 EIF4EP3-201ENST00000498782 656 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 MTCYBP27-201ENST00000555160 670 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AC026464.5-201ENST00000562497 722 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 MIR5694-201ENST00000581190 76 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AC091946.2-201ENST00000606105 291 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AL592148.2-201ENST00000612210 372 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AC093838.1-201ENST00000613014 469 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AL590808.1-201ENST00000618696 141 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AC093591.3-201ENST00000634516 308 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 AL022578.1-201ENST00000439330 1433 ntBASIC1.99□□□□□ -2.09
HDGFL3Q9Y3E1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 ELF2P3-201ENST00000445099 1506 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AL049641.1-201ENST00000441055 1948 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 RPS3AP24-201ENST00000407896 734 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 RNU2-28P-201ENST00000410457 189 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 RNA5SP508-201ENST00000411327 119 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AL356867.1-201ENST00000429623 299 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 GTF2IP20-201ENST00000431663 360 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AL512844.2-201ENST00000433990 593 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AL353691.1-201ENST00000451332 387 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 TPRKBP1-201ENST00000456243 481 ntBASIC1.98□□□□□ -2.09
HDGFL3Q9Y3E1 SUMO2P2-201ENST00000456482 255 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms