Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RNU6-1132P-201ENST00000459214 107 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 RPL23AP2-201ENST00000471227 466 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 ACA59.1-201ENST00000515966 143 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 AC012339.2-201ENST00000523996 453 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 AP000889.1-201ENST00000530968 660 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 CBX3P8-201ENST00000532412 525 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 AC068790.4-201ENST00000602474 263 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 AC004805.2-201ENST00000605382 482 ntBASIC5.58□□□□□ -1.52
NOD1Q9Y239 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.58□□□□□ -1.52
NOD1Q9Y239 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NOD1Q9Y239 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NOD1Q9Y239 MTND5P27-201ENST00000428871 1720 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.57□□□□□ -1.52
NOD1Q9Y239 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NOD1Q9Y239 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
NOD1Q9Y239 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NOD1Q9Y239 AL731566.1-201ENST00000620490 1937 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NOD1Q9Y239 RNA5SP191-201ENST00000362585 102 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 RNY3P11-201ENST00000364153 102 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.57□□□□□ -1.52
NOD1Q9Y239 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.57□□□□□ -1.52
NOD1Q9Y239 SUMO1P3-201ENST00000439961 304 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 MTCO3P8-201ENST00000453691 755 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 RN7SL385P-201ENST00000468873 276 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 RPS15AP34-201ENST00000487776 387 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 AC093852.1-201ENST00000503587 266 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 Y_RNA.680-201ENST00000516441 93 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 IGKV1-32-201ENST00000519290 311 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
NOD1Q9Y239 AL161713.1-201ENST00000555538 145 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.57□□□□□ -1.52
NOD1Q9Y239 AL391358.1-201ENST00000605342 190 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 SNORD91B-202ENST00000608459 222 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NOD1Q9Y239 AC103858.2-201ENST00000621471 543 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.57□□□□□ -1.52
NOD1Q9Y239 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NOD1Q9Y239 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NOD1Q9Y239 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NOD1Q9Y239 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.57□□□□□ -1.52
NOD1Q9Y239 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NOD1Q9Y239 AC010615.1-201ENST00000594254 1764 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 AP000542.2-201ENST00000623199 6179 ntBASIC5.57□□□□□ -1.52
NOD1Q9Y239 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NOD1Q9Y239 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NOD1Q9Y239 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NOD1Q9Y239 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NOD1Q9Y239 AL034549.2-201ENST00000618285 3373 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NOD1Q9Y239 RNY1P16-201ENST00000363063 111 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NOD1Q9Y239 MIR153-1-201ENST00000384914 90 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 CYCSP33-201ENST00000414485 327 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 AL451062.2-201ENST00000427515 271 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 SNORD127-201ENST00000458892 86 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 RNU7-4P-201ENST00000516961 62 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 AC006600.1-201ENST00000572529 153 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 AC209154.1-201ENST00000582156 337 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 MIR4420-201ENST00000583944 77 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 AL365434.2-201ENST00000607979 234 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NOD1Q9Y239 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NOD1Q9Y239 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NOD1Q9Y239 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.56□□□□□ -1.52
NOD1Q9Y239 AC083899.1-201ENST00000454465 3819 ntBASIC5.56□□□□□ -1.52
NOD1Q9Y239 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NOD1Q9Y239 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NOD1Q9Y239 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NOD1Q9Y239 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NOD1Q9Y239 RN7SKP185-201ENST00000362813 326 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 Y_RNA.214-201ENST00000364201 112 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 Y_RNA.276-201ENST00000364732 109 ntBASIC5.55□□□□□ -1.52
NOD1Q9Y239 Y_RNA.324-201ENST00000365165 102 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms