Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AL139039.1-201ENST00000401900 692 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 MIR1252-201ENST00000408861 65 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 RNU6-293P-201ENST00000411259 106 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 RNA5SP111-201ENST00000411386 101 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 RPS23P10-201ENST00000416185 486 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 RPL36AP10-201ENST00000421785 322 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AL645608.4-201ENST00000423619 154 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AC004938.1-201ENST00000438468 308 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AC011816.1-201ENST00000441346 546 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 NDUFB5P1-201ENST00000508134 564 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 CR383656.7-201ENST00000548164 174 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 FKBP1BP1-201ENST00000553366 325 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 EDDM3DP-201ENST00000554692 434 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 MIR5699-201ENST00000578903 90 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 RN7SL435P-201ENST00000584418 282 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AL158032.1-201ENST00000605401 106 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 FAM27B-201ENST00000610601 213 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AP001642.1-201ENST00000624727 2117 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
AP4E1Q9UPM8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.96□□□□□ -1.61
AP4E1Q9UPM8 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
AP4E1Q9UPM8 EIF2AP4-201ENST00000424793 1781 ntBASIC4.96□□□□□ -1.61
AP4E1Q9UPM8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
AP4E1Q9UPM8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
AP4E1Q9UPM8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.96□□□□□ -1.61
AP4E1Q9UPM8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 RNU6-989P-201ENST00000362756 107 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.350-201ENST00000365409 98 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.424-201ENST00000384063 103 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 RNU6-214P-201ENST00000384130 107 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.461-201ENST00000384263 103 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 RPS4XP7-201ENST00000406274 780 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AC092809.3-201ENST00000415453 231 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 PGBD4P6-201ENST00000421501 610 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 HMGB1P9-201ENST00000429856 646 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AC097713.2-201ENST00000430199 356 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 CHEK2P4-201ENST00000450340 246 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 RPL9P32-201ENST00000464118 620 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AC084198.1-201ENST00000477747 402 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 VN1R104P-201ENST00000505115 1009 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.715-201ENST00000517082 110 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 IGKV2D-36-201ENST00000518643 226 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AP006587.4-201ENST00000526053 529 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 GSTP1P1-201ENST00000548078 319 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 HSBP1P1-201ENST00000555205 166 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AC067852.3-201ENST00000589177 561 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AC125232.2-201ENST00000592457 143 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 IGHV3-29-201ENST00000604817 344 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AC007619.2-201ENST00000605743 379 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 AC007998.5-201ENST00000622938 237 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 MIR4272-201ENST00000635924 64 ntBASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
AP4E1Q9UPM8 DHX9P1-201ENST00000436565 3076 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AL445487.1-201ENST00000415694 1580 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 RNU6-190P-201ENST00000384154 102 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 RNU6-713P-201ENST00000384761 107 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC097374.1-203ENST00000400783 485 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 RPS26P47-201ENST00000427219 348 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AL158071.1-201ENST00000430315 461 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AL645568.3-201ENST00000433683 316 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 RPL23AP50-201ENST00000434149 455 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 AC073910.1-201ENST00000445047 438 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 MRPL48P1-201ENST00000445390 636 ntBASIC4.95□□□□□ -1.62
AP4E1Q9UPM8 BX276092.4-201ENST00000452056 248 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms