Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AP003497.1-201ENST00000528472 562 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 MIR4425-201ENST00000580572 84 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AL606834.2-201ENST00000602954 668 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AL034351.1-201ENST00000605288 668 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC073657.2-201ENST00000605661 303 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 OR10AB1P-201ENST00000609613 938 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC103710.1-201ENST00000610003 901 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC068944.2-201ENST00000610373 403 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC009159.1-201ENST00000618386 642 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 AC138649.3-201ENST00000622154 254 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 OR5H6-203ENST00000642105 978 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.53□□□□□ -1.84
SIX4Q9UIU6 HSPA8P1-201ENST00000425843 1833 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 MTND5P33-201ENST00000571250 1450 ntBASIC3.53□□□□□ -1.84
SIX4Q9UIU6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.85
SIX4Q9UIU6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 GABPAP-201ENST00000419271 1356 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 RPS4XP5-202ENST00000449995 1334 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 MTCO1P24-201ENST00000515438 1558 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 GNG5P1-201ENST00000255500 204 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 SNORA31-201ENST00000362607 130 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 RNA5SP387-201ENST00000364226 106 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 MIR548F1-201ENST00000408667 84 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 RNA5SP56-201ENST00000410277 118 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 RHEBP3-201ENST00000411920 351 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AL353777.1-201ENST00000425552 326 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 ISCA1P6-201ENST00000427740 390 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AL358934.1-201ENST00000432346 324 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 MTATP6P13-201ENST00000438531 667 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AP1S2P1-201ENST00000457344 379 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 RNU7-170P-201ENST00000459303 61 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC021382.1-201ENST00000483523 359 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 ARL2BPP6-201ENST00000512757 439 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 RNU6-506P-201ENST00000516553 94 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 OR4P1P-201ENST00000530808 1136 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC011602.1-201ENST00000546484 331 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 TPRKBP2-201ENST00000565969 475 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AL669831.4-202ENST00000590817 238 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 YPEL5P2-201ENST00000605553 359 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AF250324.2-201ENST00000608299 610 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC007684.1-201ENST00000609671 477 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AL355472.4-201ENST00000610233 626 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 uc_338.1-201ENST00000612113 180 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC012150.2-201ENST00000621300 544 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC068880.5-201ENST00000624331 290 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 PISRT1-201ENST00000626175 531 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 SEPT14P19-203ENST00000633205 211 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 AC010149.2-201ENST00000637608 315 ntBASIC3.52□□□□□ -1.85
SIX4Q9UIU6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SIX4Q9UIU6 FARSBP1-201ENST00000435808 1778 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 MIR423-201ENST00000362201 94 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 RNA5SP189-201ENST00000364920 115 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 SNORD51-201ENST00000384320 80 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SIX4Q9UIU6 RNU6-328P-201ENST00000390887 106 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 CKS1BP5-201ENST00000434172 273 ntBASIC3.51□□□□□ -1.85
SIX4Q9UIU6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms