Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC023043.3-201ENST00000593113 385 ntBASIC3.22□□□□□ -1.89
HMG20BQ9P0W2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.22□□□□□ -1.89
HMG20BQ9P0W2 API5P2-201ENST00000397055 1498 ntBASIC3.22□□□□□ -1.89
HMG20BQ9P0W2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMG20BQ9P0W2 AC233263.6-201ENST00000631132 1963 ntBASIC3.21□□□□□ -1.89
HMG20BQ9P0W2 RNA5SP68-201ENST00000363885 119 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 CD24P4-201ENST00000382840 243 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 RNU6-1197P-201ENST00000391183 107 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 ZYG11AP1-201ENST00000430329 837 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 RPS25P9-201ENST00000435591 252 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 MEMO1P3-201ENST00000459811 302 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 RPL30P9-201ENST00000465586 330 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 RPL9P33-201ENST00000484311 566 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AC096725.1-201ENST00000514266 313 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 RN7SKP282-201ENST00000516824 299 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 MTCO2P2-201ENST00000591258 225 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 RPP40P2-201ENST00000603596 712 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AC004067.1-201ENST00000608733 700 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AC243829.7-201ENST00000633081 225 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AC091564.4-201ENST00000533934 2194 ntBASIC3.21□□□□□ -1.9
HMG20BQ9P0W2 AC106754.1-201ENST00000562632 1513 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 RNU4-92P-201ENST00000363783 136 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 SNORD21-201ENST00000383953 95 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 RNU6-1207P-201ENST00000384343 107 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 Y_RNA.548-201ENST00000384656 105 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 MIR592-201ENST00000384959 97 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AL139039.1-201ENST00000401900 692 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 SNORA11.2-201ENST00000408318 127 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 BX119904.4-201ENST00000424402 301 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 OR2B8P-201ENST00000432841 938 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC090774.1-201ENST00000435925 246 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 MTND1P31-201ENST00000449206 961 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AL009048.1-201ENST00000450437 298 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 DUXAP8-207ENST00000456786 622 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 RNA5SP282-201ENST00000516355 108 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC022662.1-201ENST00000580252 331 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 MIR4635-201ENST00000583759 79 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 HSPE1P7-201ENST00000604681 321 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC106052.1-201ENST00000608029 497 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC006213.4-201ENST00000616184 634 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 AC027309.3-201ENST00000623419 351 ntBASIC3.2□□□□□ -1.9
HMG20BQ9P0W2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 RNU6-289P-201ENST00000364093 107 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 RNU1-100P-201ENST00000365255 165 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 RNU6-906P-201ENST00000384700 70 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 RNU6-1242P-201ENST00000391052 103 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 RNA5SP252-201ENST00000391131 119 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AL356421.1-201ENST00000403255 413 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AC106883.1-201ENST00000418805 562 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 SNRPEP7-201ENST00000438350 220 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AC004854.1-201ENST00000440356 349 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 MTND2P24-201ENST00000453434 806 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AC104563.1-201ENST00000476147 376 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 KC877373.1-201ENST00000479066 408 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 HSPE1P6-201ENST00000479457 291 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AL049874.1-201ENST00000489560 388 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AC147055.4-201ENST00000504399 745 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AC114781.4-201ENST00000513707 639 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AC118465.1-201ENST00000513820 1271 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AC234778.2-201ENST00000566241 354 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AC034268.2-201ENST00000571784 482 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AL133445.2-201ENST00000611191 527 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 MIR6817-201ENST00000615588 66 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 MIR6130-201ENST00000619419 109 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AC092608.2-201ENST00000624427 218 ntBASIC3.19□□□□□ -1.9
HMG20BQ9P0W2 AP000676.4-201ENST00000624659 623 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms