Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 Y_RNA.324-201ENST00000365165 102 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 RNA5SP235-201ENST00000365411 114 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 RNU6-933P-201ENST00000384424 107 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AC011933.1-201ENST00000413334 321 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 UBE2D3P2-201ENST00000424409 445 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AP000942.1-201ENST00000463969 747 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AC109327.1-201ENST00000471666 403 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AC098976.1-201ENST00000513014 541 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 RNU6-1271P-201ENST00000517049 105 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AP004371.1-201ENST00000525240 214 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 MYL12BP1-201ENST00000569826 507 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AL138825.1-201ENST00000618587 192 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 AL356489.2-201ENST00000566968 3528 ntBASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CXXC1Q9P0U4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CXXC1Q9P0U4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CXXC1Q9P0U4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 Y_RNA.314-201ENST00000365114 102 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 RNU6-395P-201ENST00000365662 106 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 Y_RNA.476-201ENST00000384347 108 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 RNA5SP171-201ENST00000391071 115 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 U3.30-201ENST00000391308 210 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AL030996.1-201ENST00000411430 235 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 NUP35P1-201ENST00000422734 947 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AC079780.1-201ENST00000428259 207 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AC016831.4-201ENST00000438302 307 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 snoU13.29-201ENST00000459370 104 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 U8.20-201ENST00000459445 131 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 NIP7P2-201ENST00000485801 544 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AC011005.2-201ENST00000487324 359 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AC023424.1-201ENST00000496058 459 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 SUMO2P6-201ENST00000505273 288 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 ACA59.1-201ENST00000515966 143 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 RNU4-77P-201ENST00000516692 156 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AL157871.3-201ENST00000557231 293 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 MIR1273C-201ENST00000578669 77 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 MIR3939-201ENST00000582614 106 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 AC091812.1-201ENST00000432235 1948 ntBASIC5.33□□□□□ -1.56
CXXC1Q9P0U4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 OR4G2P-202ENST00000641004 1759 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 AC005005.4-201ENST00000623789 16698 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 AC004656.1-201ENST00000568479 4951 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 DEFB108F-201ENST00000344638 222 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 RNU6-512P-201ENST00000364438 103 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 RNU6-596P-201ENST00000365395 98 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 MIR514A1-201ENST00000385133 98 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 CYCSP33-201ENST00000414485 327 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 RPS12P23-201ENST00000419579 400 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 RANP8-201ENST00000444720 713 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 RPL17P19-201ENST00000489069 552 ntBASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.32□□□□□ -1.56
CXXC1Q9P0U4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms