Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC00888-204ENST00000487386 421 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC002456.2-201ENST00000509356 380 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC026436.1-201ENST00000510537 270 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC108043.1-201ENST00000512696 574 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.23□□□□□ -2.05
VAPAQ9P0L0 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC022861.1-201ENST00000522981 663 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC121758.2-201ENST00000553271 193 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 HSPE1P3-201ENST00000559254 309 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 MIR4658-201ENST00000584344 65 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AL445435.1-201ENST00000604232 665 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC080013.4-201ENST00000607624 649 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AL590099.1-201ENST00000615276 138 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AL160394.1-201ENST00000624765 724 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 MIR1291-201ENST00000627649 87 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 MIR7515-201ENST00000637837 67 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 MIR1322-201ENST00000638013 71 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.23□□□□□ -2.05
VAPAQ9P0L0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.23□□□□□ -2.05
VAPAQ9P0L0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 ZNF833P-201ENST00000424938 1494 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 SNORD114-30-201ENST00000364448 72 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 RNU6-707P-201ENST00000364647 95 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 OR5H15-201ENST00000383696 930 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 SNORD65.1-201ENST00000390889 71 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 SNORA48.2-201ENST00000390926 124 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 DHFRP6-201ENST00000401776 268 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AL450338.1-201ENST00000407987 512 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 BTF3P8-201ENST00000414577 526 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 RPS7P9-201ENST00000414704 586 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 PPP1R11P2-201ENST00000423543 382 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC019097.1-201ENST00000424783 735 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 RPL7P44-201ENST00000424827 742 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC063976.3-201ENST00000426849 329 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC244505.3-201ENST00000454598 187 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC138853.1-201ENST00000503549 823 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 COL6A4P2-205ENST00000509855 506 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC107222.1-201ENST00000510899 637 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC093677.1-201ENST00000514414 678 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 HMGN2P15-201ENST00000585707 270 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC068313.1-201ENST00000604028 1008 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC103710.4-201ENST00000609301 899 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AC010975.3-201ENST00000618727 978 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.22□□□□□ -2.05
VAPAQ9P0L0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
VAPAQ9P0L0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AC008850.1-201ENST00000427546 362 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AC092634.2-201ENST00000428146 1010 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 SDCBPP1-201ENST00000440192 890 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 RNU7-26P-201ENST00000458980 63 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 RNU6-528P-201ENST00000516926 100 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AP000889.2-201ENST00000532684 490 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 PRELID2P1-201ENST00000552837 301 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AL132857.1-201ENST00000555180 708 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AC087465.1-201ENST00000560574 245 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 GTF2IP8-201ENST00000560687 584 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AC025281.1-201ENST00000567026 265 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 MIR5694-201ENST00000581190 76 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 OR2AS2P-201ENST00000606902 342 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AL392048.1-201ENST00000613946 534 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AL596245.1-201ENST00000618994 362 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 MIR6130-201ENST00000619419 109 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 AC093875.1-201ENST00000623688 504 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 CCT4P2-201ENST00000233836 1548 ntBASIC2.21□□□□□ -2.06
VAPAQ9P0L0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.21□□□□□ -2.06
VAPAQ9P0L0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 GNG5P1-201ENST00000255500 204 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VAPAQ9P0L0 RNU6-216P-201ENST00000363282 104 ntBASIC2.2□□□□□ -2.06
VAPAQ9P0L0 HMGB1P17-201ENST00000403495 628 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms