Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC133104.1-201ENST00000429100 218 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 RPL31P35-201ENST00000431058 377 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 FCF1P1-201ENST00000432690 571 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC104850.1-201ENST00000435940 476 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 MTATP6P30-201ENST00000443540 664 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 RPS11P1-201ENST00000451072 473 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 RPL9P32-201ENST00000464118 620 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 MTCO3P38-201ENST00000468910 766 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 MTAPP1-201ENST00000489154 819 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC055855.1-201ENST00000489563 579 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 VN1R104P-201ENST00000505115 1009 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 RNU6-718P-201ENST00000516166 105 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 Vault.3-201ENST00000516676 95 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 CBX3P5-201ENST00000552017 521 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC234778.2-201ENST00000566241 354 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AP001429.1-201ENST00000602568 530 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AL158211.4-201ENST00000606988 584 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC005344.1-201ENST00000613391 459 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AL359880.1-201ENST00000621879 266 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 FP236240.3-201ENST00000623061 327 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AL159972.1-201ENST00000625150 448 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AP004289.2-201ENST00000444413 1457 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 DEFB108F-201ENST00000344638 222 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 Y_RNA.9-201ENST00000362354 101 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 RNU4-12P-201ENST00000365233 139 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 RNU6-637P-201ENST00000384050 107 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 RNU6-1103P-201ENST00000384150 107 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 RPL21P17-201ENST00000397467 475 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AL078595.1-201ENST00000404458 226 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 RNA5SP129-201ENST00000410276 118 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC233728.2-201ENST00000425348 757 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC073464.1-201ENST00000429823 534 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 HMGN2P31-201ENST00000432430 273 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AL596276.1-201ENST00000434465 418 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 TBCAP1-201ENST00000436520 327 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 SNORA71B-202ENST00000439232 272 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 RBMX2P4-201ENST00000441256 376 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 PRDX3P3-201ENST00000447765 522 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 Z99127.3-201ENST00000448158 395 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 NANOGP10-201ENST00000453325 895 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 SNRPGP3-201ENST00000469405 227 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC010587.1-201ENST00000505809 469 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AP001893.2-201ENST00000526949 202 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 DEFB108D-201ENST00000527787 222 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 FAM92A1P1-201ENST00000528023 890 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 YPEL5P3-201ENST00000547227 352 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC092325.1-201ENST00000566449 554 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 MIR98-201ENST00000606724 119 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AC092954.2-201ENST00000609103 430 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 AL591424.2-201ENST00000617023 128 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 MTND5P1-201ENST00000445440 1375 ntBASIC4.01□□□□□ -1.77
VPS45Q9NRW7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS45Q9NRW7 RPS4XP5-202ENST00000449995 1334 ntBASIC4□□□□□ -1.77
VPS45Q9NRW7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms