Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC090774.1-201ENST00000435925 246 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AL592447.1-201ENST00000447592 540 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AL359385.1-201ENST00000456509 365 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 RN7SL20P-201ENST00000488827 297 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AC118282.1-201ENST00000506408 765 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 HSPE1P20-201ENST00000538133 289 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AC125611.2-201ENST00000551907 647 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AC105224.1-201ENST00000587055 421 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 GLUD1P4-201ENST00000590914 418 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 VN1R90P-201ENST00000595717 726 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AL627309.6-201ENST00000606857 840 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AL136981.2-201ENST00000617319 734 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 MIR6130-201ENST00000619419 109 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AC008993.2-201ENST00000631744 806 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 ZNF519P1-201ENST00000449011 1626 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 RNU6-97P-201ENST00000363387 104 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 SNORA4.1-201ENST00000364263 144 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 RNU6-777P-201ENST00000364265 104 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 RNU6-157P-201ENST00000383957 107 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AL356421.1-201ENST00000403255 413 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 RPL27AP8-201ENST00000424277 446 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 SAR1AP4-201ENST00000429225 591 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 TXNL1P1-201ENST00000429528 554 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 OR4K11P-201ENST00000431829 904 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC109583.1-201ENST00000432156 268 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 YWHAZP7-201ENST00000436906 631 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC108938.1-201ENST00000451204 136 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 ARL4AP2-201ENST00000507378 601 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AL359273.1-201ENST00000510918 627 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 SNORA31.22-201ENST00000517204 135 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 OR5G4P-201ENST00000525251 760 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AP003497.1-201ENST00000528472 562 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 DUXAP1-201ENST00000556632 463 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC087465.1-201ENST00000560574 245 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AL158211.1-201ENST00000566763 763 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 MIR4319-201ENST00000577285 85 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 ATP1B3P1-201ENST00000605365 821 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC090186.1-201ENST00000605991 572 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 OR2AS2P-201ENST00000606902 342 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AP003485.2-201ENST00000623636 610 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AC068787.1-201ENST00000623908 691 ntBASIC3.04□□□□□ -1.92
HPS4Q9NQG7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
HPS4Q9NQG7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HPS4Q9NQG7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.03□□□□□ -1.92
HPS4Q9NQG7 FAM35BP-202ENST00000497389 3337 ntBASIC3.03□□□□□ -1.92
HPS4Q9NQG7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
HPS4Q9NQG7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.03□□□□□ -1.92
HPS4Q9NQG7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HPS4Q9NQG7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HPS4Q9NQG7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HPS4Q9NQG7 FAM133CP-201ENST00000332869 704 ntBASIC3.03□□□□□ -1.92
HPS4Q9NQG7 RNU6-744P-201ENST00000365557 107 ntBASIC3.03□□□□□ -1.92
HPS4Q9NQG7 RNU6-76P-201ENST00000384060 104 ntBASIC3.03□□□□□ -1.92
HPS4Q9NQG7 RNU6-1316P-201ENST00000384242 108 ntBASIC3.03□□□□□ -1.92
HPS4Q9NQG7 ANAPC10P1-201ENST00000395991 556 ntBASIC3.03□□□□□ -1.92
HPS4Q9NQG7 PIGPP2-201ENST00000411569 458 ntBASIC3.03□□□□□ -1.92
HPS4Q9NQG7 HMGB1P49-201ENST00000418882 569 ntBASIC3.03□□□□□ -1.92
HPS4Q9NQG7 AL645937.1-202ENST00000421799 937 ntBASIC3.03□□□□□ -1.92
HPS4Q9NQG7 AL139281.1-201ENST00000422120 335 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms