Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC107982.1-201ENST00000507171 1300 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC080128.1-201ENST00000474389 1917 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 RNU6-741P-201ENST00000383889 107 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 RNU1-39P-201ENST00000383897 165 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AL355497.1-201ENST00000406262 551 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 RNU2-42P-201ENST00000410697 113 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC005300.1-201ENST00000428401 373 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC005326.1-201ENST00000429197 123 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 MTCO1P3-201ENST00000429327 192 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC105252.1-201ENST00000503089 286 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 XKRY-201ENST00000510392 1100 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC243972.3-201ENST00000539655 198 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC135507.1-201ENST00000607214 561 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AC067747.1-201ENST00000608026 250 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 AL512506.1-201ENST00000613918 449 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 MIR7112-201ENST00000616126 65 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 CENPCP1-201ENST00000533085 2578 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 DDX10P1-201ENST00000448545 1933 ntBASIC2.19□□□□□ -2.06
VCX3AQ9NNX9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 RNU6-140P-201ENST00000384566 108 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AL603865.2-201ENST00000401679 213 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AL079342.2-201ENST00000403367 482 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 MTCO2P5-201ENST00000422621 426 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 USP12PX-201ENST00000432383 1057 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 RPL12P25-201ENST00000455592 494 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AC008427.1-201ENST00000503102 655 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AC006499.5-201ENST00000505037 514 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AGGF1P5-201ENST00000567900 919 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 RPS3AP23-202ENST00000574601 686 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 MIR5708-201ENST00000579723 85 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AC061975.8-201ENST00000587058 721 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AC243773.3-201ENST00000613270 256 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 AC005539.1-201ENST00000443768 1479 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 KPNA2P1-201ENST00000458289 1591 ntBASIC2.18□□□□□ -2.06
VCX3AQ9NNX9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 RNU6-884P-201ENST00000363889 107 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 Y_RNA.234-201ENST00000364409 97 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 RN7SKP227-201ENST00000364445 330 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 RNU6-220P-201ENST00000390919 107 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AL031679.1-201ENST00000400616 525 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 RNA5SP120-201ENST00000410900 112 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 C1DP1-201ENST00000426049 402 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 ZNF863P-201ENST00000426746 417 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AL159987.2-201ENST00000432754 307 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC087499.2-201ENST00000432861 149 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 RPS15AP5-201ENST00000436276 388 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 Z80107.1-201ENST00000436830 412 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AL591503.2-201ENST00000442314 1005 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 RPS20P20-201ENST00000460498 340 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 LINC00888-204ENST00000487386 421 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 SCARNA11.3-201ENST00000517276 130 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC113192.3-201ENST00000529152 742 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AL138976.2-201ENST00000563989 694 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC135628.1-201ENST00000568867 534 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 MIR3616-201ENST00000584070 92 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 VN1R87P-201ENST00000596706 487 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC024220.1-201ENST00000603675 484 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 FTX_3.1-201ENST00000610451 147 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AC091948.2-201ENST00000636510 279 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms