Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RN7SKP265-201ENST00000516448 223 ntBASIC1.28□□□□□ -2.2
CHD8Q9HCK8 MTCYBP19-201ENST00000517463 1124 ntBASIC1.28□□□□□ -2.2
CHD8Q9HCK8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.28□□□□□ -2.2
CHD8Q9HCK8 AC092159.4-201ENST00000624944 550 ntBASIC1.28□□□□□ -2.2
CHD8Q9HCK8 Y_RNA.571-201ENST00000384753 98 ntBASIC1.28□□□□□ -2.2
CHD8Q9HCK8 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.28□□□□□ -2.2
CHD8Q9HCK8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.28□□□□□ -2.2
CHD8Q9HCK8 BMI1P1-201ENST00000445879 941 ntBASIC1.28□□□□□ -2.2
CHD8Q9HCK8 RPL21P131-201ENST00000497298 483 ntBASIC1.28□□□□□ -2.2
CHD8Q9HCK8 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.28□□□□□ -2.2
CHD8Q9HCK8 AC090517.3-201ENST00000625170 141 ntBASIC1.28□□□□□ -2.2
CHD8Q9HCK8 MIR6759-201ENST00000638110 65 ntBASIC1.28□□□□□ -2.2
CHD8Q9HCK8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.28□□□□□ -2.21
CHD8Q9HCK8 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CHD8Q9HCK8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CHD8Q9HCK8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.27□□□□□ -2.21
CHD8Q9HCK8 FCF1P2-201ENST00000415284 583 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.27□□□□□ -2.21
CHD8Q9HCK8 AC244035.1-201ENST00000430042 390 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 MTND4LP12-201ENST00000448237 295 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.27□□□□□ -2.21
CHD8Q9HCK8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.27□□□□□ -2.21
CHD8Q9HCK8 ABI1P1-201ENST00000603375 1120 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 FAM157A-202ENST00000615155 405 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 MIR2909-201ENST00000617113 69 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.27□□□□□ -2.21
CHD8Q9HCK8 AL512283.1-201ENST00000606756 1384 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CHD8Q9HCK8 AL096701.2-201ENST00000416920 238 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 AL357520.1-201ENST00000441557 453 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.27□□□□□ -2.21
CHD8Q9HCK8 AP004242.1-201ENST00000533701 349 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 AC008126.1-201ENST00000549019 480 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 MIR5589-201ENST00000579442 60 ntBASIC1.27□□□□□ -2.21
CHD8Q9HCK8 RNU1-23P-201ENST00000363361 144 ntBASIC1.26□□□□□ -2.21
CHD8Q9HCK8 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
CHD8Q9HCK8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 AC010735.1-201ENST00000567305 1026 ntBASIC1.26□□□□□ -2.21
CHD8Q9HCK8 AC009452.1-201ENST00000640823 606 ntBASIC1.26□□□□□ -2.21
CHD8Q9HCK8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 MIR330-201ENST00000362196 94 ntBASIC1.26□□□□□ -2.21
CHD8Q9HCK8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 RNU1-92P-201ENST00000517017 135 ntBASIC1.26□□□□□ -2.21
CHD8Q9HCK8 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.26□□□□□ -2.21
CHD8Q9HCK8 AL159169.2-201ENST00000610061 1269 ntBASIC1.26□□□□□ -2.21
CHD8Q9HCK8 U6.98-201ENST00000637157 84 ntBASIC1.26□□□□□ -2.21
CHD8Q9HCK8 AC130650.2-201ENST00000618736 2403 ntBASIC1.26□□□□□ -2.21
CHD8Q9HCK8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CHD8Q9HCK8 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 Z85994.2-201ENST00000434327 452 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.25□□□□□ -2.21
CHD8Q9HCK8 AC027673.1-201ENST00000456245 405 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.25□□□□□ -2.21
CHD8Q9HCK8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.25□□□□□ -2.21
CHD8Q9HCK8 RNU1-40P-201ENST00000516816 164 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 RNU1-97P-201ENST00000516872 164 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 HSPE1P3-201ENST00000559254 309 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 MTND5P7-201ENST00000413558 1798 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CHD8Q9HCK8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CHD8Q9HCK8 MIR1468-201ENST00000410600 86 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 RPL7P53-201ENST00000421245 739 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 AC099548.1-201ENST00000421443 426 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 ATG10-AS1-201ENST00000504846 648 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 RNU6-1334P-201ENST00000516032 105 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.25□□□□□ -2.21
CHD8Q9HCK8 MIR4448-201ENST00000584360 86 ntBASIC1.25□□□□□ -2.21
CHD8Q9HCK8 ZNF271P-202ENST00000465539 1970 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 RNU6-461P-201ENST00000364195 107 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 OR4K8P-201ENST00000578842 1048 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 RNU6-1263P-201ENST00000384601 106 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 MIR320A-201ENST00000385302 82 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 AC022431.1-201ENST00000450941 438 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 AC090071.1-201ENST00000507713 644 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 RNA5SP384-201ENST00000516615 116 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.24□□□□□ -2.21
CHD8Q9HCK8 MIR3660-201ENST00000584845 100 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 AP001029.3-201ENST00000588063 596 ntBASIC1.24□□□□□ -2.21
CHD8Q9HCK8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms