Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC117440.1-201ENST00000474107 571 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC090525.1-201ENST00000479116 478 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 RN7SL293P-201ENST00000481765 281 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC034222.1-201ENST00000494052 532 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC135721.1-201ENST00000497954 479 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC021146.8-201ENST00000507455 733 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 TBCAP3-201ENST00000512475 312 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 SNORA31.18-201ENST00000517043 134 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AL133271.1-201ENST00000538229 291 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 HPRT1P3-201ENST00000539521 576 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC106785.1-201ENST00000565935 262 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 TPMTP1-201ENST00000592307 737 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 BNIP3P27-201ENST00000599991 412 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC015871.2-201ENST00000603605 948 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AL136295.6-201ENST00000610486 658 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC245517.5-201ENST00000611529 162 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AC068831.8-201ENST00000620171 435 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 AL356863.1-201ENST00000623378 1080 ntBASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.89□□□□□ -2.11
SND1-IT1Q9HBX3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 Y_RNA.192-201ENST00000363977 102 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 TAS2R15P-201ENST00000390674 928 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 U3.19-201ENST00000390893 196 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 MTATP6P19-201ENST00000413797 659 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 USP9YP13-201ENST00000417797 480 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 HMGB1P9-201ENST00000429856 646 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 ATP5F1P1-201ENST00000433775 569 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 Z80107.1-201ENST00000436830 412 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AL445687.1-201ENST00000439946 251 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 MRPL50P4-201ENST00000446432 475 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AL031313.1-201ENST00000448435 256 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 RPS15AP34-201ENST00000487776 387 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC006499.5-201ENST00000505037 514 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC008716.1-201ENST00000511084 513 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC022447.1-201ENST00000515358 464 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 RNU6-927P-201ENST00000516199 100 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC023538.1-201ENST00000534576 736 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 UBE2L4-201ENST00000587688 464 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AF038458.1-201ENST00000588406 262 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AL356575.1-201ENST00000603008 283 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AL596327.1-201ENST00000603629 213 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AC140725.3-201ENST00000616193 880 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AL355493.4-201ENST00000618530 292 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AL158801.5-201ENST00000623123 465 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 PCMTD1P7-201ENST00000634506 357 ntBASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SND1-IT1Q9HBX3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms