Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC239868.4-201ENST00000608318 671 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 AC245517.5-201ENST00000611529 162 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
POLR1BQ9H9Y6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC008568.2-201ENST00000623862 2313 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 SNORD9-201ENST00000362566 104 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 RNU1-33P-201ENST00000364249 162 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC110754.1-201ENST00000399740 601 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 TXNP7-201ENST00000406296 293 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 RNU2-8P-201ENST00000410727 190 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 UBE2FP1-201ENST00000416536 447 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC093156.1-201ENST00000440382 670 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 MTND4LP3-201ENST00000468320 276 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 CBX3P3-201ENST00000508108 532 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 RANP9-201ENST00000519957 271 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC011611.1-201ENST00000552179 197 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AL157394.1-201ENST00000562983 1224 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC106782.4-201ENST00000568264 210 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 MIR3682-201ENST00000581338 84 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC008277.2-201ENST00000605196 797 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC245008.1-201ENST00000608123 476 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 uc_338.12-201ENST00000616344 181 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 AC099654.13-201ENST00000639774 207 ntBASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
POLR1BQ9H9Y6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 MRPL42P2-201ENST00000403169 426 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 RNA5SP120-201ENST00000410900 112 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 RPS15AP6-201ENST00000420703 385 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 NDUFB4P7-201ENST00000423198 363 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC008850.1-201ENST00000427546 362 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 USP12PX-201ENST00000432383 1057 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 MTCO2P16-201ENST00000436962 677 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC005094.1-201ENST00000440420 368 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 PGBD4P3-201ENST00000440731 581 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 MTND1P29-201ENST00000448112 647 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 MTND1P12-201ENST00000455231 147 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 RNU6-956P-201ENST00000458868 103 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 LARP1BP2-201ENST00000486594 519 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC068724.1-201ENST00000487100 792 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 RNU6-840P-201ENST00000517275 65 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 MIR3186-201ENST00000577404 85 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AP005136.1-201ENST00000579765 429 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC009977.1-201ENST00000586015 570 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AL137849.1-201ENST00000604767 169 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC106900.2-201ENST00000604994 317 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 PLCE1P1-201ENST00000622094 305 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 SCARNA15.3-201ENST00000626315 122 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 SCARNA4.1-201ENST00000628597 123 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 MIR7153-201ENST00000637758 57 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AL390237.1-201ENST00000404226 1415 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC092104.1-201ENST00000497346 1441 ntBASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
POLR1BQ9H9Y6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.5□□□□□ -1.85
POLR1BQ9H9Y6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
POLR1BQ9H9Y6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.5□□□□□ -1.85
POLR1BQ9H9Y6 RNA5SP295-201ENST00000362655 121 ntBASIC3.5□□□□□ -1.85
POLR1BQ9H9Y6 RNU6-1284P-201ENST00000363701 100 ntBASIC3.5□□□□□ -1.85
POLR1BQ9H9Y6 Y_RNA.201-201ENST00000364052 96 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms