Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC004853.1-201ENST00000604902 698 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 AL390208.1-201ENST00000605885 644 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 AC107075.1-201ENST00000613695 314 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RPAP3Q9H6T3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.09□□□□□ -1.92
RPAP3Q9H6T3 AL022578.1-201ENST00000439330 1433 ntBASIC3.09□□□□□ -1.92
RPAP3Q9H6T3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AC093831.2-201ENST00000624393 3427 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AL161431.1-201ENST00000618966 4205 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 RPL9P7-201ENST00000330965 580 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 RNU6-173P-201ENST00000364215 104 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 RNU4-68P-201ENST00000364314 141 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 RNU6-882P-201ENST00000391025 103 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 RNU6-952P-201ENST00000391164 108 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AL592310.1-201ENST00000414330 671 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AL451074.5-201ENST00000415894 435 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AL513175.2-201ENST00000422071 443 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AC092648.1-201ENST00000425870 423 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AC004866.2-201ENST00000438285 481 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 BX322784.1-201ENST00000455793 1077 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AC092798.1-201ENST00000458542 409 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AP004217.1-201ENST00000480579 346 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AC027176.1-201ENST00000560204 514 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 DUXAP11-201ENST00000603858 526 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AC005046.1-201ENST00000608515 625 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AC140725.3-201ENST00000616193 880 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AP000526.1-201ENST00000603308 1388 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 AL356473.1-201ENST00000406203 1408 ntBASIC3.08□□□□□ -1.92
RPAP3Q9H6T3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 Y_RNA.192-201ENST00000363977 102 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 SNORA67.4-201ENST00000384688 142 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 MIR493-201ENST00000385254 89 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 TPMTP2-201ENST00000414372 726 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 BEND7P1-201ENST00000422058 457 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 NANOGP5-201ENST00000424456 877 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AC004854.1-201ENST00000440356 349 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 RPL39P40-201ENST00000445481 146 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 RNU7-136P-201ENST00000458819 69 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 MTND1P16-201ENST00000465177 898 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AC128713.1-201ENST00000471495 306 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 HSPE1P6-201ENST00000479457 291 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 TRBV12-1-201ENST00000479785 344 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AC103975.1-201ENST00000482506 483 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AC008413.1-201ENST00000511864 177 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 RNU6-150P-201ENST00000516237 95 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AP001646.1-201ENST00000527936 915 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 UBTFL10-201ENST00000528532 562 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 OR7K1P-201ENST00000546439 926 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AL512310.1-201ENST00000548639 172 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 OR4K7P-201ENST00000580232 945 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AC083760.1-201ENST00000589621 670 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 MTCO2P2-201ENST00000591258 225 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AC012443.1-201ENST00000605605 231 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AC092953.2-201ENST00000608000 699 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 Z99129.2-201ENST00000619967 314 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 AL079343.1-201ENST00000572358 1771 ntBASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RPAP3Q9H6T3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 RNU6-343P-201ENST00000364709 104 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 MIR627-201ENST00000384979 97 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 AC009963.1-201ENST00000417265 157 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 MTCO2P5-201ENST00000422621 426 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 SDCBPP1-201ENST00000440192 890 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 AC234775.1-201ENST00000454247 670 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 USP9YP25-201ENST00000457708 443 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 AC097493.1-201ENST00000463958 372 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 AC108729.1-201ENST00000487812 947 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 AC118282.1-201ENST00000506408 765 ntBASIC3.06□□□□□ -1.92
RPAP3Q9H6T3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms