Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RN7SKP13-201ENST00000515933 244 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 SNORA70.24-201ENST00000517233 118 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC022790.1-201ENST00000522872 204 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 HIF1AP1-201ENST00000553642 175 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC007424.1-203ENST00000554613 687 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AL121576.1-201ENST00000556055 276 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 LARP7P2-201ENST00000575306 125 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC011816.2-201ENST00000607089 556 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 RMST_3.1-201ENST00000611651 109 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AL732618.1-201ENST00000623251 301 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC243312.2-201ENST00000623340 601 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 AC139792.3-201ENST00000623525 224 ntBASIC3.83□□□□□ -1.8
EBF3Q9H4W6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
EBF3Q9H4W6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 RNU4-79P-201ENST00000362764 141 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 Y_RNA.159-201ENST00000363674 87 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 Y_RNA.326-201ENST00000365176 113 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 RNU6-282P-201ENST00000365357 103 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 RNU6-769P-201ENST00000384407 104 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 DHFRP6-201ENST00000401776 268 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 PIGFP2-201ENST00000421400 651 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 RPL21P109-201ENST00000422213 475 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 RPL31P35-201ENST00000431058 377 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 SKP1P1-201ENST00000438081 489 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 FGF7P4-201ENST00000509595 295 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 RNU6-1281P-201ENST00000516223 105 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 COX6CP8-201ENST00000522620 226 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AL157394.1-201ENST00000562983 1224 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 MAGOH2P-202ENST00000584384 429 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 BNIP3P10-201ENST00000605360 577 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
EBF3Q9H4W6 PRO1804-201ENST00000623780 2050 ntBASIC3.82□□□□□ -1.8
EBF3Q9H4W6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC007823.1-201ENST00000569932 1566 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 MTND5P1-201ENST00000445440 1375 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 Y_RNA.381-201ENST00000365666 102 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 RNU6-1227P-201ENST00000383981 107 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 MIR490-201ENST00000384865 128 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 MIR483-201ENST00000385070 76 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC002075.2-201ENST00000425207 252 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AL513185.2-201ENST00000425543 193 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 GTF2IP20-201ENST00000431663 360 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 TAAR7P-201ENST00000436141 242 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 RSU1P2-202ENST00000437884 485 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC132479.1-201ENST00000449160 144 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC084198.1-201ENST00000477747 402 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC114967.1-201ENST00000504890 259 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 HMGN1P13-201ENST00000505795 138 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AP003181.2-201ENST00000528941 181 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AL512310.1-201ENST00000548639 172 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AL359212.1-201ENST00000556608 614 ntBASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.81□□□□□ -1.8
EBF3Q9H4W6 MIR4504-201ENST00000577413 92 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms