Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC034268.2-201ENST00000571784 482 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 MIR5092-201ENST00000583139 88 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 RPL12P50-201ENST00000603116 116 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AL031281.1-201ENST00000604049 488 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC006023.2-201ENST00000609916 167 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AL356585.4-201ENST00000623078 1229 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC079228.1-201ENST00000624774 1049 ntBASIC3.04□□□□□ -1.92
RNF41Q9H4P4 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RNF41Q9H4P4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 RNU6-1200P-201ENST00000384162 107 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AL356131.1-201ENST00000405826 414 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 MTCYBP34-201ENST00000439552 670 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 MTCYBP3-201ENST00000445588 1137 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC002381.1-201ENST00000447049 280 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 MTND1P31-201ENST00000449206 961 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AL590639.1-201ENST00000456484 337 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AL139824.2-201ENST00000458731 1095 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC093281.2-201ENST00000510153 597 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 ZNF321P-202ENST00000550843 495 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AL163153.1-201ENST00000554223 283 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC012182.1-201ENST00000570133 895 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC136618.2-201ENST00000575091 400 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC004853.1-201ENST00000604902 698 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AL590282.1-201ENST00000610379 1136 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AP000770.2-201ENST00000623694 100 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 AC007490.1-201ENST00000624321 703 ntBASIC3.03□□□□□ -1.92
RNF41Q9H4P4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RNF41Q9H4P4 API5P2-201ENST00000397055 1498 ntBASIC3.03□□□□□ -1.93
RNF41Q9H4P4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 MIR27B-201ENST00000385129 97 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 RNA5SP210-201ENST00000391034 120 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC079780.1-201ENST00000428259 207 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AL008629.1-201ENST00000438615 184 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 COX6CP2-201ENST00000444980 225 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 ST13P20-201ENST00000447996 1065 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 GSTA11P-201ENST00000452866 669 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 MEMO1P3-201ENST00000459811 302 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 RPS27AP1-201ENST00000475545 471 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC012181.1-201ENST00000479895 423 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 RN7SL499P-201ENST00000481141 276 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 HMGB1P36-201ENST00000487709 576 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 LTV1P1-201ENST00000510683 1237 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 RNU4-29P-201ENST00000515943 174 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AP003461.1-201ENST00000528866 78 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 OR7K1P-201ENST00000546439 926 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC123904.3-201ENST00000547218 814 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AL391156.1-201ENST00000554965 554 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AL353997.4-201ENST00000586196 166 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC021171.1-201ENST00000603137 706 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC004987.4-201ENST00000603383 338 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 BX664608.1-201ENST00000610519 487 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 MIR6817-201ENST00000615588 66 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF41Q9H4P4 SGO1P2-201ENST00000429458 1589 ntBASIC3.02□□□□□ -1.93
RNF41Q9H4P4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms