Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS11Q9H270 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS11Q9H270 OR5B10P-201ENST00000532869 642 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS11Q9H270 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS11Q9H270 AL161670.1-201ENST00000554348 137 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 MIR3118-1-201ENST00000581787 76 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 AC245389.1-201ENST00000605141 529 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS11Q9H270 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS11Q9H270 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS11Q9H270 FAM157A-202ENST00000615155 405 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 uc_338.15-201ENST00000615470 191 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 Z69720.2-201ENST00000624755 279 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VPS11Q9H270 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VPS11Q9H270 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS11Q9H270 ASNSP3-201ENST00000451989 1306 ntBASIC4.43□□□□□ -1.7
VPS11Q9H270 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS11Q9H270 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
VPS11Q9H270 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS11Q9H270 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VPS11Q9H270 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS11Q9H270 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
VPS11Q9H270 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 Y_RNA.307-201ENST00000365022 117 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 SNORA20.2-201ENST00000383922 131 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 RNU6-606P-201ENST00000384721 111 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
VPS11Q9H270 MRPL42P2-201ENST00000403169 426 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AC078974.1-201ENST00000411597 223 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS11Q9H270 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS11Q9H270 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS11Q9H270 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS11Q9H270 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS11Q9H270 AL353777.1-201ENST00000425552 326 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AL160004.2-201ENST00000432935 350 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS11Q9H270 PSMD10P3-201ENST00000437000 448 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 HMGB3P22-202ENST00000451823 572 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 RPL7P15-201ENST00000461190 712 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 RPL32P9-201ENST00000487963 407 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 MTCO1P29-201ENST00000496868 288 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AC078918.1-201ENST00000498515 228 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS11Q9H270 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS11Q9H270 FAM206BP-201ENST00000510179 541 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS11Q9H270 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS11Q9H270 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS11Q9H270 HMGB1P41-201ENST00000520234 440 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS11Q9H270 SUMO2P20-201ENST00000520803 283 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 CR383656.7-201ENST00000548164 174 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 BNIP3P6-201ENST00000549284 499 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS11Q9H270 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS11Q9H270 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS11Q9H270 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS11Q9H270 AC012669.1-201ENST00000603209 283 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AL031176.1-201ENST00000604554 466 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AC091953.2-201ENST00000623979 160 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 U2.22-201ENST00000636441 106 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 AC010149.2-201ENST00000637608 315 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
VPS11Q9H270 SDAD1P1-202ENST00000524156 2051 ntBASIC4.42□□□□□ -1.7
VPS11Q9H270 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS11Q9H270 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS11Q9H270 AC006971.1-201ENST00000407916 4486 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS11Q9H270 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS11Q9H270 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS11Q9H270 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS11Q9H270 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS11Q9H270 RNA5SP388-201ENST00000362584 119 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 Y_RNA.158-201ENST00000363651 101 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 RNU6-853P-201ENST00000364306 107 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 SET-203ENST00000372688 801 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS11Q9H270 DEFB109C-201ENST00000382575 264 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 DEFB109B-201ENST00000382656 264 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 MIR3074-201ENST00000384885 81 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 RNA5SP39-201ENST00000411245 120 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS11Q9H270 ERLEC1P1-201ENST00000433806 578 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 AL049745.1-201ENST00000433953 286 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS11Q9H270 AC108734.1-201ENST00000439549 399 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms