Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RAC1P3-201ENST00000416129 580 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC005019.1-201ENST00000436455 431 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC108734.1-201ENST00000439549 399 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.73□□□□□ -1.81
CDT1Q9H211 AL662791.1-201ENST00000441992 928 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 MTND6P13-201ENST00000443510 523 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.73□□□□□ -1.81
CDT1Q9H211 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.73□□□□□ -1.81
CDT1Q9H211 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.73□□□□□ -1.81
CDT1Q9H211 HMGN2P7-201ENST00000456186 273 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.73□□□□□ -1.81
CDT1Q9H211 AC013267.1-201ENST00000458227 267 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 SNORD121B-201ENST00000458838 81 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 RPL21P10-201ENST00000463521 490 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.73□□□□□ -1.81
CDT1Q9H211 AC106872.2-201ENST00000494303 480 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC069439.1-201ENST00000494739 167 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AP001086.1-201ENST00000494882 321 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.73□□□□□ -1.81
CDT1Q9H211 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.73□□□□□ -1.81
CDT1Q9H211 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.73□□□□□ -1.81
CDT1Q9H211 NDUFB4P9-201ENST00000511646 388 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.73□□□□□ -1.81
CDT1Q9H211 SNORA18.6-201ENST00000516792 115 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC123904.2-201ENST00000548059 300 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.73□□□□□ -1.81
CDT1Q9H211 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.73□□□□□ -1.81
CDT1Q9H211 NCAPGP2-201ENST00000557911 754 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.73□□□□□ -1.81
CDT1Q9H211 MIR4738-201ENST00000579134 87 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC060771.1-201ENST00000582031 164 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.73□□□□□ -1.81
CDT1Q9H211 AC020914.4-201ENST00000597690 277 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC012669.1-201ENST00000603209 283 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AL359999.1-201ENST00000604513 294 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC007179.3-201ENST00000604976 235 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AL357078.3-201ENST00000607528 618 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 U4.5-201ENST00000617137 123 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC009159.1-201ENST00000618386 642 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AL158209.2-201ENST00000619266 216 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 RMST_9.1-201ENST00000619945 193 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 AC012150.2-201ENST00000621300 544 ntBASIC3.73□□□□□ -1.81
CDT1Q9H211 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.73□□□□□ -1.81
CDT1Q9H211 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDT1Q9H211 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CDT1Q9H211 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDT1Q9H211 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.73□□□□□ -1.81
CDT1Q9H211 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.73□□□□□ -1.81
CDT1Q9H211 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDT1Q9H211 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDT1Q9H211 FAM35DP-201ENST00000323387 2712 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDT1Q9H211 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDT1Q9H211 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CDT1Q9H211 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDT1Q9H211 RNA5SP267-201ENST00000364893 126 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 RNU4-12P-201ENST00000365233 139 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.72□□□□□ -1.81
CDT1Q9H211 U3.20-201ENST00000390909 217 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.72□□□□□ -1.81
CDT1Q9H211 SPA17P1-201ENST00000416656 452 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AL358934.1-201ENST00000432346 324 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 MTND4LP10-201ENST00000435146 291 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.72□□□□□ -1.81
CDT1Q9H211 UBE2V1P13-201ENST00000436983 439 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.72□□□□□ -1.81
CDT1Q9H211 RPS29P31-201ENST00000446147 164 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.72□□□□□ -1.81
CDT1Q9H211 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.72□□□□□ -1.81
CDT1Q9H211 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.72□□□□□ -1.81
CDT1Q9H211 RPS3AP17-201ENST00000472594 777 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 RPS3AP14-201ENST00000483907 780 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 MTND1P3-201ENST00000484956 952 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 FCF1P8-201ENST00000510322 597 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AC008549.1-201ENST00000512900 643 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 RNU2-46P-201ENST00000517038 113 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 RNU6-201P-201ENST00000517100 61 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.72□□□□□ -1.81
CDT1Q9H211 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.72□□□□□ -1.81
CDT1Q9H211 AC022616.6-201ENST00000520479 119 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.72□□□□□ -1.81
CDT1Q9H211 OR5D17P-201ENST00000531492 978 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AK6P1-201ENST00000540219 478 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.72□□□□□ -1.81
CDT1Q9H211 CR383656.7-201ENST00000548164 174 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.72□□□□□ -1.81
CDT1Q9H211 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.72□□□□□ -1.81
CDT1Q9H211 AC090616.5-202ENST00000582111 297 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.72□□□□□ -1.81
CDT1Q9H211 AL160281.1-201ENST00000605307 311 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AL391813.2-201ENST00000609113 322 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AL355472.4-201ENST00000610233 626 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.72□□□□□ -1.81
CDT1Q9H211 AC002550.2-201ENST00000621246 394 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 AL356321.1-201ENST00000621360 228 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 CR381653.2-201ENST00000624041 768 ntBASIC3.72□□□□□ -1.81
CDT1Q9H211 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.72□□□□□ -1.81
CDT1Q9H211 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDT1Q9H211 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDT1Q9H211 AC066616.2-201ENST00000559334 1481 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms