Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU1-105P-201ENST00000363470 161 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 SET-203ENST00000372688 801 ntTSL 2 BASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 SNORD51-201ENST00000384320 80 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AL031659.1-201ENST00000447075 539 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AL021397.1-201ENST00000451806 248 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 RNU6-717P-201ENST00000459076 104 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 RPL30P5-201ENST00000494923 336 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 IGJP1-201ENST00000522682 475 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AC233266.2-201ENST00000567067 528 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AC096586.1-201ENST00000610267 561 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 MIR6132-201ENST00000622083 109 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AC079597.1-201ENST00000624306 508 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 CU459211.1-201ENST00000635667 749 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AP000553.5-201ENST00000641933 54 ntBASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 CR848007.1-201ENST00000442354 1699 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AL356292.1-201ENST00000283110 373 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 DEFB108F-201ENST00000344638 222 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 RNU6-1155P-201ENST00000363554 107 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 SNORD82-201ENST00000365530 70 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 RNU6-198P-201ENST00000384258 104 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 RNU6-1197P-201ENST00000391183 107 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AL023284.1-201ENST00000403956 276 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 MIR1290-201ENST00000408735 78 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AC244453.4-201ENST00000419150 388 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AC009414.1-201ENST00000427200 443 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 MTND4LP14-201ENST00000429447 288 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AC090096.1-201ENST00000489168 390 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AC103833.1-201ENST00000517442 172 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 DEFB108D-201ENST00000527787 222 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 OR4P1P-201ENST00000530808 1136 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AL136363.1-201ENST00000605349 337 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AP000254.1-201ENST00000609934 520 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AC004852.3-201ENST00000614131 326 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 OR1S1-201ENST00000624470 978 ntBASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.5□□□□□ -2.01
UPF3BQ9BZI7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 SNORA6-201ENST00000384033 151 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 SNORA48.3-201ENST00000391081 134 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 SNORA26.9-201ENST00000391322 122 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 ARL2BPP3-201ENST00000421226 480 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 AC092170.1-201ENST00000440211 356 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 USP9YP8-201ENST00000441913 500 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 MTND5P8-201ENST00000449817 1083 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 AC109486.1-201ENST00000486833 374 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 HMGB3P3-201ENST00000510526 400 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 RNU5A-7P-201ENST00000515979 116 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 AMZ2P1-203ENST00000565833 850 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 BPTFP1-201ENST00000579209 492 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 MIR4781-201ENST00000585250 76 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 AL355802.4-201ENST00000607635 548 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 AC010378.1-201ENST00000619270 362 ntBASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.49□□□□□ -2.01
UPF3BQ9BZI7 AL137003.2-201ENST00000606924 2538 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 Y_RNA.118-201ENST00000363300 101 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 Y_RNA.508-201ENST00000384502 114 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AL139156.1-201ENST00000412785 841 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AL121871.1-201ENST00000443413 436 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC233279.1-201ENST00000455300 423 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 RNU6-420P-201ENST00000458780 107 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC090255.1-201ENST00000495779 349 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AC093767.1-201ENST00000504523 156 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 RNU6-27P-201ENST00000516146 107 ntBASIC2.48□□□□□ -2.01
UPF3BQ9BZI7 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms