Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM55Q9BYV6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 Y_RNA.11-201ENST00000362375 109 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 RNU4-73P-201ENST00000363164 141 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 Y_RNA.534-201ENST00000384599 112 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 SNORA16.2-201ENST00000390991 127 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AL590704.1-201ENST00000402856 794 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AL122016.1-201ENST00000403365 367 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 RNA5SP239-201ENST00000410218 129 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 Z85995.1-201ENST00000415547 335 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 USP9YP20-201ENST00000419224 558 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 BX842559.1-201ENST00000419615 532 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 HSPE1P1-201ENST00000421494 318 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AL451062.2-201ENST00000427515 271 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 RNU7-66P-201ENST00000459469 62 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 RPL31P60-201ENST00000478450 367 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AC103851.1-201ENST00000506833 274 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 OR5D17P-201ENST00000531492 978 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AC093249.4-201ENST00000564755 259 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AC106900.2-201ENST00000604994 317 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AL121932.1-201ENST00000605542 214 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AC087045.1-201ENST00000605856 382 ntBASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM55Q9BYV6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 MIR448-201ENST00000362131 111 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 RNU6-1167P-201ENST00000363227 94 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 RNU6-393P-201ENST00000384475 107 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 BX682237.1-201ENST00000415016 335 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC007390.1-201ENST00000415722 356 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AL669831.1-202ENST00000428504 417 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 HSPD1P21-201ENST00000436541 245 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 GTF2IP13-201ENST00000438487 386 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 HMGB3P11-201ENST00000440127 604 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 FGF7P3-201ENST00000454645 303 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 RPL37P6-201ENST00000460682 294 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC010469.1-201ENST00000463864 576 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 RPL7P5-201ENST00000471472 736 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC012181.1-201ENST00000479895 423 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 FGF7P4-201ENST00000509595 295 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 RNU6-189P-201ENST00000516120 101 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC105029.1-201ENST00000520250 669 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC026464.5-201ENST00000562497 722 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC005668.1-201ENST00000571142 476 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 MIR3690-201ENST00000580266 75 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC005498.1-201ENST00000592125 465 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC098826.3-201ENST00000603823 466 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AL592436.1-201ENST00000605135 558 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AL391358.1-201ENST00000605342 190 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AC107294.1-201ENST00000609524 467 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 AL132765.2-201ENST00000610812 351 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 TPTEP1-208ENST00000636884 213 ntBASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRIM55Q9BYV6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
TRIM55Q9BYV6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRIM55Q9BYV6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms